Evidence map›Paper›PMID 15608221›Full record

ArticleNucleic acids research2005

WormBase: a comprehensive data resource for Caenorhabditis biology and genomics.

Nansheng Chen, Todd W Harris, Igor Antoshechkin, Carol Bastiani, Tamberlyn Bieri, Darin Blasiar, Keith Bradnam, Payan Canaran, Juancarlos Chan, Chao-Kung Chen and 21 more

Abstract read
In one paragraph

Article in Nucleic acids research, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 99 papers.

0numbers the graph read from it
0cells of the map it votes in
99citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

99 citing papers in PubMed.

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39 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

31 authors.

Nansheng ChenCold Spring Harbor Laboratory, 1 Bungtown Road, Cold Spring Harbor, NY 11724, USA. chenn@cshl.org
Todd W Harris
Igor Antoshechkin
Carol Bastiani
Tamberlyn Bieri
Darin Blasiar
Keith Bradnam
Payan Canaran
Juancarlos Chan
Chao-Kung Chen
Wen J Chen
Fiona Cunningham
Paul Davis
Eimear Kenny
Ranjana Kishore
Daniel Lawson
Raymond Lee
Hans-Michael Muller
Cecilia Nakamura
Shraddha Pai
Philip Ozersky
Andrei Petcherski
Anthony Rogers
Aniko Sabo
Erich M Schwarz
Kimberly Van Auken
Qinghua Wang
Richard Durbin
John Spieth
Paul W Sternberg
Lincoln D Stein

Funding

Wormbase SupplementP41HG002223 · NHGRI · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI STERNBERG, PAUL WARREN · 2000 to 2012
$32.0M
NHGRI NIH HHS P41 HG002223NHGRI NIH HHS P41-HG02223
6 · The paper itself

Abstract

WormBase (http://www.wormbase.org), the model organism database for information about Caenorhabditis elegans and related nematodes, continues to expand in breadth and depth. Over the past year, WormBase has added multiple large-scale datasets including SAGE, interactome, 3D protein structure datasets and NCBI KOGs. To accommodate this growth, the International WormBase Consortium has improved the user interface by adding new features to aid in navigation, visualization of large-scale datasets, advanced searching and data mining. Internally, we have restructured the database models to rationalize the representation of genes and to prepare the system to accept the genome sequences of three additional Caenorhabditis species over the coming year.

Indexed as

Databases, GeneticGenomicsAnimalsCaenorhabditisCaenorhabditis elegansCaenorhabditis elegans ProteinsGene Expression ProfilingProtein ConformationSoftwareSystems IntegrationTwo-Hybrid System TechniquesUser-Computer InterfaceCaenorhabditis elegans Proteins

Identifiers

PMID15608221
PMCPMC540020

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.