Evidence map›Paper›PMID 15607424›Full record

ArticleGenomics2005

Microarray analysis of gene/transcript expression in Angelman syndrome: deletion versus UPD.

Douglas C Bittel, Nataliya Kibiryeva, Zohreh Talebizadeh, Daniel J Driscoll, Merlin G Butler

Open access · greenAbstract read
In one paragraph

Article in Genomics, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 29 citations in OpenAlex.

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  13. Whole genome microarray analysis of gene expression in Prader-Willi syndrome.American journal of medical genetics. Part A · 2007
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Douglas C BittelSection of Medical Genetics and Molecular Medicine, Children's Mercy Hospitals and Clinics and University of Missouri at Kansas City School of Medicine, 2401 Gillham Road, Kansas City, MO 64108, USA. dbittel@cmh.edu
Nataliya Kibiryeva
Zohreh Talebizadeh
Daniel J Driscoll
Merlin G Butler
Children's Mercy Hospital · USUniversity of Florida · US

Funding

COMPULSIVE FOOD-SEEKING &FOOD MOTIVATION IN PWSR01HD041672 · NICHD · UNIVERSITY OF ROCHESTER · PI ZARCONE, JENNIFER R · 2001 to 2005
$1.2M
NICHD NIH HHS R01 HD041672
6 · The paper itself

Abstract

Angelman syndrome (AS) is a neurodevelopmental disorder due to a functional deficit, usually a deletion, of the UBE3A gene located in the 15q11-q13 chromosome region. We report the first microarray analysis of gene expression in AS using a custom cDNA microarray to compare expression patterns from lymphoblastoid cell lines from control males and AS subjects with a 15q deletion or uniparental paternal disomy 15. Expression patterns of genes known to be biallelically expressed or paternally or maternally expressed were consistent with expectations. We detected paternal or maternal allelic bias in the expression of several genes and transcripts (e.g., GABRA5, GABRB3, WI-14946). Additionally, mechanisms controlling paternal allele expression appear to be faithfully replicated in each paternal chromosome in individuals with paternal disomy. Our results indicate that interconnected mechanisms can produce subtle and unexpected changes in gene expression that may help explain the phenotypic differences observed among the genetic subtypes of AS.

Indexed as

Chromosome DeletionUniparental DisomyAllelesAngelman SyndromeCell LineChromosomes, Human, Pair 15Gene Expression ProfilingGene Expression RegulationHumansMaleMicroarray AnalysisPhenotypeTranscription, GeneticUbiquitin-Protein LigasesUBE3A protein, humanUbiquitin-Protein Ligases

Identifiers

PMID15607424
PMCPMC6800218
OpenAlexW1997639239

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.