Evidence map›Paper›PMID 15604716›Full record

ArticlePlant molecular biology2004

Different subcellular localization and trafficking properties of KNOX class 1 homeodomain proteins from rice.

Suzanne J H Kuijt, Gerda E M Lamers, Saskia Rueb, Enrico Scarpella, Pieter B F Ouwerkerk, Herman P Spaink, Annemarie H Meijer

Abstract read
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In one paragraph

Article in Plant molecular biology, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.6field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 27 citations in OpenAlex.

  1. Article
  2. Overexpression ofPlant signaling & behavior · 2022
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  4. Biolistic Approach for Transient Gene Expression Studies in Plants.Methods in molecular biology (Clifton, N.J.) · 2020
    Review
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  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Suzanne J H KuijtInstitute of Biology, Leiden University, Wassenaarseweg 64, 2333 AL, Leiden, the Netherlands.
Gerda E M Lamers
Saskia Rueb
Enrico Scarpella
Pieter B F Ouwerkerk
Herman P Spaink
Annemarie H Meijer
Leiden University · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Genes of the KN1-like homeobox (KNOX) class 1 encode transcription factors involved in shoot apical meristem development and maintenance. We studied the subcellular localization of Green Fluorescent Protein-tagged rice KNOX proteins (Oskn1-3) after particle bombardment of onion and rice cells and after transformation of Arabidopsis and rice with constitutive and inducible expression constructs. In all test systems, the three rice KNOX proteins showed nuclear and cytoplasmic localization patterns. However, Oskn1 additionally showed in some cells a distribution over punctae moving randomly in the cytosol. Use of an inducible expression system indicated a nuclear presence of Oskn1 in cells of the shoot apical meristem and post-transcriptional down-regulation in early leaf primordia. Arabidopsis and rice test systems were used to study effects of plant hormones and auxin transport inhibition on KNOX protein localization. Application of GA3 or 1-NAA shifted protein localization completely to the cytoplasm and resulted in loss of the punctae formed by Oskn1. Conversely, NPA application induced a complete nuclear localization of the KNOX proteins. To study intercellular movement of the KNOX proteins we set up a novel co-bombardment assay in which trafficking of untagged KNOX proteins was visualized through the co-trafficking of green fluorescent or blue fluorescent marker proteins. In multiple independent experiments Oskn1 trafficked more extensively to neighboring cells than Oskn2 and Oskn3. Differences in the localization and trafficking properties of Oskn1, Oskn2 and Oskn3 correlate with differences in mRNA localization patterns and functional differences between the rice KNOX genes and their putative orthologues from other species.

Indexed as

2,4-Dichlorophenoxyacetic AcidAmino Acid SequenceArabidopsisBenzyl CompoundsGibberellinsGreen Fluorescent ProteinsHomeodomain ProteinsMolecular Sequence DataNaphthaleneacetic AcidsOnionsOryzaPlant EpidermisPlant Growth RegulatorsPlant LeavesPlant ProteinsPlants, Genetically Modified1-naphthaleneacetic acid2,4-Dichlorophenoxyacetic AcidbenzylaminopurineBenzyl CompoundsGibberellinsGreen Fluorescent ProteinsHomeodomain ProteinsKnox1 protein, plantNaphthaleneacetic AcidsPlant Growth RegulatorsPlant ProteinsProtein IsoformsPurinesRecombinant Fusion Proteins

Identifiers

PMID15604716
OpenAlexW2126657425

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.