Evidence map›Paper›PMID 15604703›Full record

ArticlePlant molecular biology2004

Ribosomal RNA processing and an RNase R family member in chloroplasts of Arabidopsis.

Masahiro Kishine, Atsushi Takabayashi, Yuri Munekage, Toshiharu Shikanai, Tsuyoshi Endo, Fumihiko Sato

Abstract readComparative Study
PubMed Publisher
In one paragraph

Article in Plant molecular biology, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
1.2field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 52 citations in OpenAlex.

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  10. Mechanism of RNA stabilization and translational activation by a pentatricopeptide repeat protein.Proceedings of the National Academy of Sciences of the United States of America · 2011
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Masahiro KishineGraduate School of Biostudies, Kyoto University, Japan.
Atsushi Takabayashi
Yuri Munekage
Toshiharu Shikanai
Tsuyoshi Endo
Fumihiko Sato
Kyoto University · JPKyushu University · JPNara Institute of Science and Technology · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

An Arabidopsis mutant rnr1 , which has a defect in the basic genetic system in chloroplasts, was isolated using the screening of the high chlorophyll fluorescence phenotype. Whereas chlorophyll fluorescence and immunoblot studies showed the mutant had reduced activities of photosystems I and II, molecular characterization of the mutant suggested that a T-DNA insertion impaired the expression of a gene encoding a RNase R family member with a targeting signal to chloroplasts. Since RNase R family members have a 3'-5' exoribonuclease activity, we examined the RNA profile in chloroplasts. In rnr1 the intercistronic cleavage between 23S and 4.5S rRNA was impaired, and a significant reduction in rRNA in chloroplasts was found, suggesting that RNR1 functions in the maturation of chloroplast rRNA. The present results suggest that defects in the genetic system in chloroplasts cause high chlorophyll fluorescence, pale green leaf, and marked reduction in the growth rate, whereas the levels of some chloroplast RNA were higher in rnr1 than in the wild-type.

Indexed as

RNA Processing, Post-TranscriptionalAmino Acid SequenceArabidopsisChlorophyllChloroplastsCloning, MolecularElectron TransportEndoribonucleasesExoribonucleasesFluorescenceGenetic Complementation TestGreen Fluorescent ProteinsImmunoblottingMicroscopy, ConfocalMolecular Sequence DataMutationChlorophyllEndoribonucleasesExoribonucleasesGreen Fluorescent ProteinsRecombinant Fusion Proteinsribonuclease RRNA, ChloroplastRNA, Ribosomal

Identifiers

PMID15604703
OpenAlexW1985859021

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.