Evidence map›Paper›PMID 15604697›Full record

ArticlePlant molecular biology2004

Chalcone synthase as a reporter in virus-induced gene silencing studies of flower senescence.

Jen-Chih Chen, Cai-Zhong Jiang, Timothy E Gookin, Donald A Hunter, David G Clark, Michael S Reid

Abstract readComparative Study
PubMed Publisher
In one paragraph

Article in Plant molecular biology, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 61 papers.

0numbers the graph read from it
0cells of the map it votes in
61citing papers in PubMed
9.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

61 citing papers in PubMed, 184 citations in OpenAlex.

  1. Virus-induced gene silencing inPlant biotechnology (Tokyo, Japan) · 2026
    Article
  2. Article
  3. Article
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  5. Article
  6. A petunia transcription factor,Horticulture research · 2023
    Article
  7. Article
  8. Article
  9. Article
  10. International journal of molecular sciences · 2022
    Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. International journal of molecular sciences · 2020
    Article
  16. Horticulture research · 2019
    Article
  17. Article
  18. Article
  19. Article
  20. Article

1 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Jen-Chih ChenDepartment of Environmental Horticulture, University of California Davis, One Shields Avenue, CA 95616, USA.
Cai-Zhong Jiang
Timothy E Gookin
Donald A Hunter
David G Clark
Michael S Reid
University of California, Davis · USPennsylvania State University · USUniversity of Florida · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Agrobacterium-mediated infection of petunia (Petunia hybrida) plants with tobacco rattle virus (TRV) bearing fragments of Petunia genes resulted in systemic infection and virus-induced gene silencing (VIGS) of the homologous host genes. Infection with TRV containing a phytoene desaturase (PDS) fragment resulted in reduced abundance of PDS transcripts and typical photobleaching of photosynthetic tissues. Infection with TRV containing a chalcone synthase (CHS) fragment resulted in silencing of anthocyanin production in infected flowers. The silencing phenotype ranged from scattered white spots on the normal purple background to entirely white flowers. Symptoms in the V26 cultivar were a diffuse mosaic, but infection of some purple-flowered commercial cultivars resulted in large white sectors and even entirely white flowers. Abundance of CHS transcripts in the white flowers was less than 4% of that in purple flowers on the same plant. Infection with TRV containing a tandem construct of PDS and CHS resulted in leaf photobleaching and white patterns on the flowers. Transcripts of CHS and PDS were reduced both in leaves and in flowers confirming simultaneous silencing of both genes by the tandem construct. We tested the effects of infection with TRV containing CHS and a fragment of a petunia gene encoding for 1-aminocyclopropane-1-carboxylate oxidase (ACO4) Abundance of transcripts encoding ACO4 and ACO1 were reduced (by 5% and 20%, respectively) in infected flowers. Whether the flowers were treated with ACC or pollinated, the white (silenced) flowers or flower sectors produced less ethylene and senesced later than purple (non-silenced) tissues. These results indicate the value of VIGS with tandem constructs containing CHS as reporter and a target gene as a tool for examining the function of floral-associated genes.

Indexed as

Gene SilencingAcyltransferasesAmino Acid OxidoreductasesAnthocyaninsEthylenesFlowersGene Expression Regulation, EnzymologicGene Expression Regulation, PlantGenetic MarkersNicotianaPetuniaPhenotypePlants, Genetically ModifiedPlant VirusesPlasmidsPollen1-aminocyclopropane-1-carboxylic acid oxidaseAcyltransferasesAmino Acid OxidoreductasesAnthocyaninsethyleneEthylenesflavanone synthetaseGenetic MarkersRNA, Plant

Identifiers

PMID15604697
OpenAlexW2146981414

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.