Evidence map›Paper›PMID 15599766›Full record

ArticleHuman genetics2005

A novel ARH splice site mutation in a Mexican kindred with autosomal recessive hypercholesterolemia.

Samuel Canizales-Quinteros, Carlos A Aguilar-Salinas, Adriana Huertas-Vázquez, María L Ordóñez-Sánchez, Maribel Rodríguez-Torres, José L Venturas-Gallegos, Laura Riba, Salvador Ramírez-Jimenez, Rocío Salas-Montiel, Giovani Medina-Palacios and 8 more

Abstract read
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In one paragraph

Article in Human genetics, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed, 1 pooled it
0.5field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 1 synthesis or guideline pooled it, 20 citations in OpenAlex.

  1. Pooled it
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  3. Article
  4. Article
  5. Balkan journal of medical genetics : BJMG · 2021
    Article
  6. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 4 institutions in 2 countries.

Samuel Canizales-QuinterosInstituto de Investigaciones Biomédicas de la Universidad Nacional Autónoma de México e Instituto Nacional de Ciencias Médicas y Nutrición Salvador Zubirán", Vasco de Quiroga #15 Colonia Sección 16, Mexico City, 14000 Tlalpan, Mexico. cani@servidor.unam.mx
Carlos A Aguilar-Salinas
Adriana Huertas-Vázquez
María L Ordóñez-Sánchez
Maribel Rodríguez-Torres
José L Venturas-Gallegos
Laura Riba
Salvador Ramírez-Jimenez
Rocío Salas-Montiel
Giovani Medina-Palacios
Ludivina Robles-Osorio
Angel Miliar-García
Luis Rosales-León
Blanca H Ruiz-Ordaz
Alejandro Zentella-Dehesa
Adrian Ferré-D'Amare
Francisco J Gómez-Pérez
Ma Teresa Tusié-Luna
Instituto Nacional de Ciencias Médicas y Nutrición Salvador Zubirán · MXUniversidad Nacional Autónoma de México · MXFred Hutch Cancer Center · USInstituto Politécnico Nacional · MX

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Autosomal recessive hypercholesterolemia (ARH) is characterized by elevated LDL serum levels, xanthomatosis, and premature coronary artery disease. Three loci have been described for this condition (1p35, 15q25-q26 and 13q). Recently, the responsible gene at the 1p35 locus, encoding an LDL receptor adaptor protein (ARH) has been identified. We studied a Mexican ARH family with two affected siblings. Sequence analysis of the ARH gene (1p35 locus) revealed that the affected siblings are homozygous for a novel mutation (IVS4+2T>G) affecting the donor splice site in intron 4, whereas both the parents and an unaffected sister are heterozygous for this mutation. The IVS4+2T>G mutation results in a major alternative transcript derived from a cryptic splice site, which carries an in-frame deletion of 78 nucleotides in the mature mRNA. The translation of this mRNA yields a mutant protein product (ARH-26) lacking 26 amino acids, resulting in the loss of beta-strands beta6 and beta7 from the PTB domain. This is the first case where a naturally occurring mutant with an altered PTB domain has been identified.

Indexed as

Genes, RecessiveMutationAdaptor Proteins, Signal TransducingAdultAmino Acid SequenceConsanguinityFemaleHumansHypercholesterolemiaMaleMexicoMolecular Sequence DataPedigreeProtein Structure, TertiaryRNA Splice SitesXanthomatosisAdaptor Proteins, Signal TransducingLDLRAP1 protein, humanRNA Splice Sites

Identifiers

PMID15599766
OpenAlexW2021788183

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.