Evidence map›Paper›PMID 15599555›Full record

ArticleMammalian genome : official journal of the International Mammalian Genome Society2004

Conservation of genomic imprinting at the XIST, IGF2, and GTL2 loci in the bovine.

Scott V Dindot, Kathleen C Kent, Bret Evers, Naida Loskutoff, James Womack, Jorge A Piedrahita

Abstract read
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In one paragraph

Article in Mammalian genome : official journal of the International Mammalian Genome Society, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
2.9field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 88 citations in OpenAlex.

  1. Epigenetic Reprogramming and Somatic Cell Nuclear Transfer.Methods in molecular biology (Clifton, N.J.) · 2023
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  18. Nutrition, epigenetics, and metabolic syndrome.Antioxidants & redox signaling · 2012
    Review
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Scott V DindotDepartment of Veterinary Anatomy and Public Health, College of Veterinary Medicine, Texas A&M University, College Station, Texas 77843, USA.
Kathleen C Kent
Bret Evers
Naida Loskutoff
James Womack
Jorge A Piedrahita
Texas A&M University · USNorth Carolina State University · US

Funding

Transgenesis and XenotransplantationR01HL051587 · NHLBI · TEXAS A&M UNIVERSITY SYSTEM · PI PIEDRAHITA, JORGE A · 1994 to 2013
$3.2M
NHLBI NIH HHS HL51587
6 · The paper itself

Abstract

Genomic imprinting is theorized to exist in all placental mammals and some marsupials; however, extensive comparative analysis of animals aside from humans and mice remains incomplete. Here we report conservation of genomic imprinting in the bovine at the X chromosome inactivation-specific transcript (XIST), insulin-like growth factor 2 (IGF2), and gene trap locus 2 (GTL2) loci. Coding single nucleotide polymorphisms (SNPs) between Bos gaurus and Bos taurus were detected at the XIST, IGF2, and GTL2 loci, which have previously been identified as imprinted in either humans, mice, or sheep. Expression patterns of parental alleles in F1 hybrids indicated preferential paternal expression at the XIST locus solely in the chorion of females, whereas analysis of the IGF2 and GTL2 loci indicated preferential paternal and maternal expression of alleles, respectively, in both fetal and placental tissues. Comparative sequence analysis of the XIST locus and adjacent regions suggests that repression of the maternal allele in the bovine is controlled by a different mechanism than in mice, further reinforcing the importance of comparative analysis of imprinting.

Indexed as

Gene Expression RegulationPolymorphism, Single NucleotideAllelesAnimalsBase SequenceCattleDNA MethylationFemaleGenomic ImprintingHumansInsulin-Like Growth Factor IIMaleMolecular Sequence DataPlacentaProteinsRNA, Long NoncodingInsulin-Like Growth Factor IIMEG3 non-coding RNA, humanProteinsRNA, Long NoncodingRNA, UntranslatedXIST non-coding RNA

Identifiers

PMID15599555
OpenAlexW1976329188

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.