Evidence map›Paper›PMID 15598737›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2004

Massive horizontal transfer of mitochondrial genes from diverse land plant donors to the basal angiosperm Amborella.

Ulfar Bergthorsson, Aaron O Richardson, Gregory J Young, Leslie R Goertzen, Jeffrey D Palmer

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 81 papers.

0numbers the graph read from it
0cells of the map it votes in
81citing papers in PubMed
8.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

81 citing papers in PubMed, 269 citations in OpenAlex.

  1. Article
  2. Article
  3. Mitochondrial Genome Analysis ofEcology and evolution · 2025
    Article
  4. Characterization of the Mitochondrial Genome ofPlants (Basel, Switzerland) · 2025
    Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Complete mitochondrial genome ofFrontiers in plant science · 2024
    Article
  10. Article
  11. Article
  12. The garden asparagus (Frontiers in plant science · 2023
    Article
  13. Article
  14. Article
  15. Article
  16. Horizontal Gene Transfers in Plants.Life (Basel, Switzerland) · 2021
    Review
  17. Article
  18. Horizontal Gene Transfer Involving Chloroplasts.International journal of molecular sciences · 2021
    Review
  19. Article
  20. Article

21 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Ulfar BergthorssonDepartment of Biology, Indiana University, Bloomington, IN 47405-3700, USA.
Aaron O Richardson
Gregory J Young
Leslie R Goertzen
Jeffrey D Palmer
Indiana University Bloomington · USAuburn University · US

Funding

TRANSFER OF ORGANELLE GENES TO THE NUCLEUSR01GM035087 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI PALMER, JEFFREY D · 1985 to 2004
$1.8M
NIGMS NIH HHS R01 GM035087NIGMS NIH HHS R01-GM-35087
6 · The paper itself

Abstract

Several plants are known to have acquired a single mitochondrial gene by horizontal gene transfer (HGT), but whether these or any other plants have acquired many foreign genes is entirely unclear. To address this question, we focused on Amborella trichopoda, because it was already known to possess one horizontally acquired gene and because it was found in preliminary analyses to contain several more. We comprehensively sequenced the mitochondrial protein gene set of Amborella, sequenced a variable number of mitochondrial genes from 28 other diverse land plants, and conducted phylogenetic analyses of these sequences plus those already available, including the five sequenced mitochondrial genomes of angiosperms. Results indicate that Amborella has acquired one or more copies of 20 of its 31 known mitochondrial protein genes from other land plants, for a total of 26 foreign genes, whereas no evidence for HGT was found in the five sequenced genomes. Most of the Amborella transfers are from other angiosperms (especially eudicots), whereas others are from nonangiosperms, including six striking cases of transfer from (at least three different) moss donors. Most of the transferred genes are intact, consistent with functionality and/or recency of transfer. Amborella mtDNA has sustained proportionately more HGT than any other eukaryotic, or perhaps even prokaryotic, genome yet examined.

Indexed as

EnvironmentDNA, MitochondrialGenes, PlantGene Transfer, HorizontalGenome, PlantMagnoliopsidaMolecular Sequence DataPhylogenyPlantsDNA, Mitochondrial

Identifiers

PMID15598737
PMCPMC539785
OpenAlexW2141045504

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.