Evidence map›Paper›PMID 15583277›Full record

ArticleJournal of clinical microbiology2004

Genotypic and phenotypic heterogeneity among Mycobacterium tuberculosis isolates from pulmonary tuberculosis patients.

Isdore Chola Shamputa, Leen Rigouts, Lovet Achale Eyongeta, Nabil Abdullah El Aila, Armand van Deun, Abdul Hamid Salim, Eve Willery, Camille Locht, Philip Supply, Françoise Portaels

Erratum issuedOpen access · greenAbstract readEvaluation Study
In one paragraph

Article in Journal of clinical microbiology, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 59 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
59citing papers in PubMed, 2 pooled it
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

59 citing papers in PubMed, 2 syntheses or guidelines pooled it, 97 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Trial
  4. Article
  5. Article
  6. Culture-Free Whole Genome Sequencing ofOpen forum infectious diseases · 2024
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  8. Review
  9. Effect of mixed strain infections on clinical and epidemiological features of tuberculosis in Florida.Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases · 2021
    Article
  10. Article
  11. Article
  12. Article
  13. Circulation ofPathogens and global health · 2019
    Review
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

10 authors at 4 institutions in 3 countries.

Isdore Chola ShamputaMycobacteriology Unit, Department of Microbiology, Prince Leopold Institute of Tropical Medicine, Nationalestraat 155, B-2000 Antwerp, Belgium. icshamputa@itg.be
Leen Rigouts
Lovet Achale Eyongeta
Nabil Abdullah El Aila
Armand van Deun
Abdul Hamid Salim
Eve Willery
Camille Locht
Philip Supply
Françoise Portaels
Instituut voor Tropische Geneeskunde · BEInstitut Pasteur de Lille · FRDamien Foundation · BDInserm · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Although the heterogeneity of Mycobacterium tuberculosis populations and the existence of mixed infections are now generally accepted, systematic studies on their relative importance are rare. In the present study, 10 individual colonies of each M. tuberculosis isolate (primary isolate) from 97 tuberculosis patients in a primarily human immunodeficiency virus-negative population were screened for heterogeneity and detectable mixed infections by spoligotyping, IS6110-based restriction fragment length polymorphism analysis, and mycobacterial interspersed repetitive unit-variable number of tandem repeat typing. The MICs of antituberculosis drugs for colonies with divergent fingerprints were determined. Infections with different bacterial subpopulations were detected in the samples from eight patients (8.2%), and the frequency of detectable mixed infections in the study population was estimated to be 2.1%. Genotypic variations were found to be independent of the drug susceptibilities, and the various molecular markers evolved independently in most cases. The predominant strains and the primary isolates always had concordant drug susceptibility and MIC testing results. These findings have implications on the interpretation of molecular epidemiology results for patient follow-up and in transmission studies.

Indexed as

AdolescentAdultAgedAged, 80 and overAnti-Bacterial AgentsBacterial Typing TechniquesDNA Transposable ElementsFemaleGenotypeHumansMaleMicrobial Sensitivity TestsMiddle AgedMinisatellite RepeatsMolecular EpidemiologyMycobacterium tuberculosisAnti-Bacterial AgentsDNA Transposable ElementsOligonucleotides

Identifiers

PMID15583277
PMCPMC535260
OpenAlexW2120648124

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.