Evidence map›Paper›PMID 15583015›Full record

ArticleThe Journal of experimental medicine2004

Dynamic repositioning of CD4 and CD8 genes during T cell development.

Stephanie Delaire, Yina Hsing Huang, Shaio Wei Chan, Ellen A Robey

Open access · greenAbstract read
In one paragraph

Article in The Journal of experimental medicine, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 34 citations in OpenAlex.

  1. Review
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  11. The role of CTCF in regulating nuclear organization.The Journal of experimental medicine · 2008
    Article
  12. Article
  13. Review
  14. Review
  15. Dynamics of transcription and mRNA export.Current opinion in cell biology · 2005
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Stephanie DelaireDepartment of Molecular and Cell Biology, 475 Life Science Additions, University of California, Berkeley, Berkeley, CA 94720, USA.
Yina Hsing Huang
Shaio Wei Chan
Ellen A Robey
University of California, Berkeley · US

Funding

THE ROLE OF CD8 AND CD4 IN T CELL DEVELOPMENTR01AI032985 · NIAID · UNIVERSITY OF CALIFORNIA BERKELEY · PI ROBEY, ELLEN A · 1992 to 2005
$1.5M
Temporal and spatial aspects of thymocyte developmentR01AI053039 · NIAID · UNIVERSITY OF CALIFORNIA BERKELEY · PI ROBEY, ELLEN A · 2003 to 2006
$996k
NIAID NIH HHS AI053039NIAID NIH HHS AI32985NIAID NIH HHS R01 AI032985NIAID NIH HHS R01 AI053039
6 · The paper itself

Abstract

Although stable repression of CD4 and CD8 genes is a central feature of T cell lineage commitment, we lack detailed information about the timing and mechanism of this repression. Stable gene repression has been linked to the position of genes within the nucleus. Therefore, information about the nuclear position of CD4 and CD8 genes during T cell development could provide insights into both the mechanism of regulation of CD4 and CD8 genes, and the process of lineage commitment. Here, we report that lineage-specific repression of CD4 and CD8 genes is associated with the repositioning of alleles close to heterochromatin. We also provide evidence that the relocalization of CD4 and CD8 genes to heterochromatin can occur as an early response to positive selection signals. We discuss our results in terms of our current knowledge of CD4 and CD8 gene regulation and CD4 versus CD8 lineage commitment.

Indexed as

AnimalsCD4 AntigensCD8 AntigensCell LineageChromosome MappingHeterochromatinMiceMice, Inbred C57BLMice, TransgenicReceptors, Antigen, T-CellRNA, MessengerT-LymphocytesCD4 AntigensCD8 AntigensHeterochromatinReceptors, Antigen, T-CellRNA, Messenger

Identifiers

PMID15583015
PMCPMC2211942
OpenAlexW2102651905

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.