Evidence map›Paper›PMID 15579536›Full record

ArticleThe Journal of physiology2004

Accessibility of mid-segment domain IV S6 residues of the voltage-gated Na+ channel to methanethiosulfonate reagents.

Akihiko Sunami, Arlene Tracey, Ian W Glaaser, Gregory M Lipkind, Dorothy A Hanck, Harry A Fozzard

Abstract readComparative Study
In one paragraph

Article in The Journal of physiology, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

  1. Article
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  6. Review
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  12. The activation gate and gating mechanism of the NMDA receptor.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2008
    Article
  13. Article
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  15. Article
  16. Article
  17. Physiological and pharmacologic aspects of peripheral nerve blocks.Journal of anaesthesiology, clinical pharmacology
    Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Akihiko SunamiDepartment of Medicine, University of Chicago, Chicago, IL 60637, USA.
Arlene Tracey
Ian W Glaaser
Gregory M Lipkind
Dorothy A Hanck
Harry A Fozzard

Funding

STRUCTURE-FUNCTION OF THE CARDIAC SODIUM CHANNELR01HL065661 · NHLBI · UNIVERSITY OF CHICAGO · PI HANCK, DOROTHY A. · 2000 to 2008
$2.8M
NHLBI NIH HHS R01 HL065661NHLBI NIH HHS R01 HL-65661
6 · The paper itself

Abstract

The inner pore of the voltage-gated Na+ channel is predicted by the structure of bacterial potassium channels to be lined with the four S6 alpha-helical segments. Our previously published model of the closed pore based on the KcsA structure, and our new model of the open pore based on the MthK structure predict which residues in the mid-portion of S6 face the pore. We produced cysteine mutants of the mid-portion of domain IV-S6 (Ile-1575-Leu-1591) in NaV 1.4 and tested their accessibility to intracellularly and extracellularly placed positively charged methanethiosulfonate (MTS) reagents. We found that only two mutants, F1579C and V1583C, were accessible to both outside and inside 2-(aminoethyl)-methanethiosulfonate hydrobromide (MTSEA) Further study of those mutants showed that efficient closure of the fast inactivation gate prevented block by inside [2-(trimethylammonium)ethyl]methanethiosulfonate bromide (MTSET) at slow stimulation rates. When fast inactivation was inhibited by exposure to anthropleurin B (ApB), increasing channel open time, both mutants were blocked by inside MTSET at a rate that depended on the amount of time the channel was open. Consistent with the fast inactivation gate limiting access to the pore, in the absence of ApB, inside MTSET produced block when the cells were stimulated at 5 or 20 Hz. We therefore suggest that the middle of IV-S6 is an alpha-helix, and we propose a model of the open channel, based on MthK, in which Phe-1579 and Val-1583 face the pore.

Indexed as

Models, MolecularAmino Acid SubstitutionAnimalsCell LineHumansMesylatesMuscle ProteinsPeptide FragmentsProtein Structure, SecondaryProtein Structure, TertiaryRatsSodium ChannelsXenopusMesylatesmethanethiosulfonateMuscle ProteinsPeptide FragmentsScn4a protein, ratSodium Channels

Identifiers

PMID15579536
PMCPMC1665359

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.