Evidence map›Paper›PMID 15574883›Full record

ArticleMolecular biology of the cell2005

Transcriptional networks and cellular senescence in human mammary fibroblasts.

K Hardy, L Mansfield, A Mackay, S Benvenuti, S Ismail, P Arora, M J O'Hare, P S Jat

Open access · greenAbstract readComparative Study
In one paragraph

Article in Molecular biology of the cell, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 70 citations in OpenAlex.

  1. Review
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  5. Article
  6. Transcriptomic Analysis of Human PodocytesKidney international reports · 2023
    Article
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  8. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

K HardyLudwig Institute for Cancer Research, University College School of Medicine, London W1W 7BS, United Kingdom.
L Mansfield
A Mackay
S Benvenuti
S Ismail
P Arora
M J O'Hare
P S Jat
Ludwig Cancer Research · GBThe Royal Free Hospital · GB

Funding

Breast Cancer Now BREAST CANCER NOW RESEARCH CENTREWellcome Trust
6 · The paper itself

Abstract

Senescence, the molecular program that limits the finite proliferative potential of a cell, acts as an important barrier to protect the body from cancer. Techniques for measuring transcriptome changes and for modulating their expression suggest that it may be possible to dissect the transcriptional networks underlying complex cellular processes. HMF3A cells are conditionally immortalized human mammary fibroblasts that can be induced to undergo coordinated senescence. Here, we used these cells in conjunction with microarrays, RNA interference, and in silico promoter analysis to promote the dissection of the transcriptional networks responsible for regulating cellular senescence. We first identified changes in the transcriptome when HMF3A cells undergo senescence and then compared them with those observed upon replicative senescence in primary human mammary fibroblasts. In addition to DUSP1 and known p53 and E2F targets, a number of genes such as PHLDA1, NR4A3, and a novel splice variant of STAC were implicated in senescence. Their role in senescence was then analyzed by RNA silencing followed by microarray analysis. In silico promoter analysis of all differential genes predicted that nuclear factor-kappaB and C/EBP transcription factors are activated upon senescence, and we confirmed this by electrophoretic mobility shift assay. The results suggest a putative signaling network for cellular senescence.

Indexed as

Cellular SenescenceTranscription, GeneticCell Cycle ProteinsCell Line, TransformedCells, CulturedCulture Media, Serum-FreeDNA-Binding ProteinsDual Specificity Phosphatase 1Electrophoretic Mobility Shift AssayFemaleFibroblastsGene Expression RegulationGene SilencingHumansImmediate-Early ProteinsMammary Glands, HumanCell Cycle ProteinsCulture Media, Serum-FreeDNA-Binding ProteinsDual Specificity Phosphatase 1DUSP1 protein, humanImmediate-Early ProteinsNerve Tissue ProteinsNF-kappa BNR4A3 protein, humanPHLDA1 protein, humanPhosphoprotein PhosphatasesProtein Phosphatase 1Protein Tyrosine PhosphatasesReceptors, SteroidReceptors, Thyroid HormoneSTAC protein, humanTranscription FactorsTumor Suppressor Protein p53

Identifiers

PMID15574883
PMCPMC545924
OpenAlexW2129431648

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.