Evidence map›Paper›PMID 15574200›Full record

ArticleMolecular cancer2004

CpG methylation of the FHIT, FANCF, cyclin-D2, BRCA2 and RUNX3 genes in Granulosa cell tumors (GCTs) of ovarian origin.

Varinderpal S Dhillon, Mohd Shahid, Syed Akhtar Husain

Open access · goldAbstract read
In one paragraph

Article in Molecular cancer, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 89 citations in OpenAlex.

  1. The Effects ofCells · 2026
    Article
  2. Article
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  5. Article
  6. Article
  7. FHIT, a Novel Modifier Gene in Pulmonary Arterial Hypertension.American journal of respiratory and critical care medicine · 2019
    Article
  8. Article
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  14. Fanconi anaemia: from a monogenic disease to sporadic cancer.Clinical & translational oncology : official publication of the Federation of Spanish Oncology Societies and of the National Cancer Institute of Mexico · 2011
    Review
  15. Epigenetic changes of DNA repair genes in cancer.Journal of molecular cell biology · 2011
    Review
  16. Article
  17. Susceptibility pathways in Fanconi's anemia and breast cancer.The New England journal of medicine · 2010
    Review
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 2 countries.

Varinderpal S DhillonCSIRO Health Sciences and Nutrition, Gate No 13, Kintore Avenue, PO Box 10041, Adelaide BC, Adelaide SA 5000, Australia. varinderpal.dhillon@csiro.au
Mohd Shahid
Syed Akhtar Husain
Jamia Millia Islamia · INCSIRO Health and Biosecurity · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundGranulosa cell tumors (GCTs) are relatively rare and are subtypes of the sex-cord stromal neoplasms. Methylation induced silencing in the promoters of genes such as tumor suppressor genes, DNA repair genes and pro-apoptotic genes is recognised as a critical factor in cancer development.

methodsWe examined the role of promoter hypermethylation, an epigenetic alteration that is associated with the silencing tumor suppressor genes in human cancer, by studying 5 gene promoters in 25 GCTs cases by methylation specific PCR and RT-PCR. In addition, the compatible tissues (normal tissues distant from lesion) from three non-astrocytoma patients were also included as the control.

resultsFrequencies of methylation in GCTs were 7/25 (28 % for FHIT), 6/25 (24% for FNACF), 3/25 (12% for Cyclin D2), 1/25 (4% for BRCA2) and 14/25 (56%) in RUNX3 genes. Correlation of promoter methylation with clinical characteristics and other genetic changes revealed that overall promoter methylation was higher in more advanced stage of the disease. Promoter methylation was associated with gene silencing in GCT cell lines. Treatment with methylation or histone deacetylation-inhibiting agents resulted in profound reactivation of gene expression.

conclusionsThese results may have implications in better understanding the underlying epigenetic mechanisms in GCT development, provide prognostic indicators, and identify important gene targets for treatment.

Indexed as

DNA MethylationAcid Anhydride HydrolasesAdultApoptosisBis(5'-adenosyl)triphosphataseBRCA2 ProteinCell Line, TumorCore Binding Factor Alpha 3 SubunitCpG IslandsCyclin D2CyclinsDNA-Binding ProteinsDNA RepairFanconi Anemia Complementation Group F ProteinFemaleGene SilencingAcid Anhydride HydrolasesBis(5'-adenosyl)triphosphataseBRCA2 ProteinCCND2 protein, humanCore Binding Factor Alpha 3 SubunitCyclin D2CyclinsDNA-Binding ProteinsFANCF protein, humanFanconi Anemia Complementation Group F ProteinNeoplasm ProteinsRNA-Binding ProteinsRunx3 protein, humanTranscription Factors

Identifiers

PMID15574200
PMCPMC538268
OpenAlexW2127901166

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.