ArticleJournal of molecular evolution1992
Substitutional bias confounds inference of cyanelle origins from sequence data.
Article in Journal of molecular evolution, 1992. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.
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Who cites it
35 citing papers in PubMed.
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- Comparative genomics of the genusMicrobial genomics · 2020Article
- Deep Residual Neural Networks Resolve Quartet Molecular Phylogenies.Molecular biology and evolution · 2020Article
- Differences in Performance among Test Statistics for Assessing Phylogenomic Model Adequacy.Genome biology and evolution · 2018Article
- The polyphyly ofRoyal Society open science · 2018Article
- Codon usage analysis of photolyase encoding genes of cyanobacteria inhabiting diverse habitats.3 Biotech · 2017Article
- Nuclear and mitochondrial genes for inferring Trichuris phylogeny.Parasitology research · 2015Article
- Probabilistic models of eukaryotic evolution: time for integration.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2015Review
- The rise of army ants and their relatives: diversification of specialized predatory doryline ants.BMC evolutionary biology · 2014Article
- Conflicting phylogenies for early land plants are caused by composition biases among synonymous substitutions.Systematic biology · 2014Article
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- A phylometagenomic exploration of oceanic alphaproteobacteria reveals mitochondrial relatives unrelated to the SAR11 clade.PloS one · 2011Article
- Sources of signal in 62 protein-coding nuclear genes for higher-level phylogenetics of arthropods.PloS one · 2011Article
- A simple, fast, and accurate method of phylogenomic inference.Genome biology · 2008Article
- The origin of plastids.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2008Article
- SCaFoS: a tool for selection, concatenation and fusion of sequences for phylogenomics.BMC evolutionary biology · 2007Article
- Genetic and morphological variation of bee-parasitic Tropilaelaps mites (Acari: Laelapidae): new and re-defined species.Experimental & applied acarology · 2007Article
- Heterotachy and long-branch attraction in phylogenetics.BMC evolutionary biology · 2005Article
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5 authors.
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Abstract
Available molecular and biochemical data offer conflicting evidence for the origin of the cyanelle of Cyanophora paradoxa. We show that the similarity of cyanelle and green chloroplast sequences is probably a result of these two lineages independently developing the same pattern of directional nucleotide change (substitutional bias). This finding suggests caution should be exercised in the interpretation of nucleotide sequence analyses that appear to favor the view of a common endosymbiont for the cyanelle and chlorophyll-b-containing chloroplasts. The data and approaches needed to resolve the issue of cyanelle origins are discussed. Our findings also have general implications for phylogenetic inference under conditions where the base compositions (compositional bias) of the sequences analyzed differ.
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