Evidence map›Paper›PMID 15555555›Full record

ArticleBiochemical and biophysical research communications2004

Prediction of quaternary assembly of SARS coronavirus peplomer.

Andrea Bernini, Ottavia Spiga, Arianna Ciutti, Stefano Chiellini, Luisa Bracci, Xiyun Yan, Bojian Zheng, Jiandong Huang, Ming-Liang He, Huai-Dong Song and 3 more

Open access · greenAbstract readComparative Study
In one paragraph

Article in Biochemical and biophysical research communications, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Article
  6. Article
  7. Review
  8. SARS molecular epidemiology: a Chinese fairy tale of controlling an emerging zoonotic disease in the genomics era.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2007
    Review
  9. Article
  10. Article
  11. Article
  12. Cross-host evolution of severe acute respiratory syndrome coronavirus in palm civet and human.Proceedings of the National Academy of Sciences of the United States of America · 2005
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 7 institutions in 5 countries.

Andrea BerniniDepartment of Molecular Biology, Biomolecular Structure Research Center, University of Siena, I-53100 Siena, Italy.
Ottavia Spiga
Arianna Ciutti
Stefano Chiellini
Luisa Bracci
Xiyun Yan
Bojian Zheng
Jiandong Huang
Ming-Liang He
Huai-Dong Song
Pei Hao
Guoping Zhao
Neri Niccolai
University of Siena · ITUniversity of Hong Kong · HKChinese National Human Genome Center · CNCity University of Hong Kong · HKCzech Academy of Sciences, Institute of Biophysics · CZGenomics Medicine (Ireland) · IEGuangzhou Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The tertiary structures of the S1 and S2 domains of the spike protein of the coronavirus which is responsible of the severe acute respiratory syndrome (SARS) have been recently predicted. Here a molecular assembly of SARS coronavirus peplomer which accounts for the available functional data is suggested. The interaction between S1 and S2 appears to be stabilised by a large hydrophobic network of aromatic side chains present in both domains. This feature results to be common to all coronaviruses, suggesting potential targeting for drugs preventing coronavirus-related infections.

Indexed as

Models, ChemicalModels, MolecularAmino Acid SubstitutionBinding SitesComputer SimulationMembrane GlycoproteinsProtein BindingProtein ConformationProtein Structure, QuaternaryProtein Structure, TertiarySequence Analysis, ProteinSpike Glycoprotein, CoronavirusStructure-Activity RelationshipViral Envelope ProteinsMembrane GlycoproteinsSpike Glycoprotein, Coronavirusspike glycoprotein, SARS-CoVViral Envelope Proteins

Identifiers

PMID15555555
PMCPMC7092937
OpenAlexW2052312932

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.