Evidence map›Paper›PMID 15542856›Full record

ArticleMolecular and cellular biology2004

Sox7 plays crucial roles in parietal endoderm differentiation in F9 embryonal carcinoma cells through regulating Gata-4 and Gata-6 expression.

Sugiko Futaki, Yoshitaka Hayashi, Tomomi Emoto, Charles N Weber, Kiyotoshi Sekiguchi

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 84 citations in OpenAlex.

  1. Article
  2. Journey of the mouse primitive endoderm: from specification to maturation.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2022
    Review
  3. Article
  4. Article
  5. Genetics of diaphragmatic hernia.European journal of human genetics : EJHG · 2021
    Review
  6. Review
  7. Article
  8. Article
  9. SOX7 Target Genes and Their Contribution to Its Tumor Suppressive Function.International journal of molecular sciences · 2018
    Article
  10. A novel role forDevelopment (Cambridge, England) · 2018
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Role of GATA factors in development, differentiation, and homeostasis of the small intestinal epithelium.American journal of physiology. Gastrointestinal and liver physiology · 2014
    Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Sugiko FutakiSekiguchi Biomatrix Signaling Project, Japanese Science and Technology Agency, Aichi Medical University, 21 Karimata, Yazako Nagakute-cho, Aichi-gun, Aichi 480-1195, Japan.
Yoshitaka Hayashi
Tomomi Emoto
Charles N Weber
Kiyotoshi Sekiguchi
Aichi Medical University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

During early rodent development, the parietal endoderm appears from an inner cell mass and produces large amounts of basement membrane components, such as laminin-1 and collagen IV. To elucidate the regulatory network for gene expression during these procedures, we constructed a series of short interfering RNA expression vectors targeted to various transcription factors, transfected them into F9 embryonal carcinoma cells, and evaluated the effects of the gene silencing on the induction of parietal endoderm differentiation and basement membrane component production by treating F9 cells with all trans-retinoic acid and dibutyryl cyclic AMP. Among the transcription factors tested, silencing of Sox7 or combined silencing of Gata-4 and Gata-6 resulted in suppression of cell shape changes and laminin-1 production, which are the hallmarks of parietal endoderm differentiation. In cells silenced for Sox7, induction of Gata-4 and Gata-6 by retinoic acid and cyclic AMP treatment was inhibited, while induction of Sox7 was not affected in cells silenced for Gata-4 and Gata-6, indicating that Sox7 is an upstream regulatory factor for these Gata factors. Nevertheless, silencing of Sox7 did not totally cancel the action of retinoic acid, since upregulation of coup-tf2, keratin 19, and retinoic acid receptor beta2 was not abolished in Sox7-silenced F9 cells. Although overexpression of Sox7 alone was insufficient to induce parietal endoderm differentiation, overexpression of Gata-4 or Gata-6 in Sox7-silenced F9 cells restored the differentiation into parietal endoderm. Sox7 is therefore required for the induction of Gata-4 and Gata-6, and the interplay among these transcription factors plays a crucial role in parietal endoderm differentiation.

Indexed as

Gene Expression Regulation, DevelopmentalGene Expression Regulation, NeoplasticAnimalsBasement MembraneBlotting, WesternCarcinomaCell DifferentiationCell Line, TumorCell NucleusCollagen Type IVCyclic AMPDNA-Binding ProteinsDNA, ComplementaryEndodermGATA4 Transcription FactorGATA6 Transcription FactorCollagen Type IVCyclic AMPDNA-Binding ProteinsDNA, ComplementaryGATA4 Transcription FactorGata6 protein, mouseGATA6 Transcription FactorHigh Mobility Group ProteinsLamininlaminin 1laminin ARNA, MessengerRNA, Small InterferingSox7 protein, mouseSOXF Transcription FactorsTranscription FactorsTretinoin

Identifiers

PMID15542856
PMCPMC529033
OpenAlexW2117480088

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.