Evidence map›Paper›PMID 15539471›Full record

ArticleThe Plant cell2004

Characterization of antirrhinum petal development and identification of target genes of the class B MADS box gene DEFICIENS.

Melanie Bey, Kurt Stüber, Kurt Fellenberg, Zsuzsanna Schwarz-Sommer, Hans Sommer, Heinz Saedler, Sabine Zachgo

Open access · bronzeAbstract read
In one paragraph

Article in The Plant cell, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
18.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 104 citations in OpenAlex.

  1. Review
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  8. Genetic Analysis of Natural Variation inFrontiers in plant science · 2017
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Melanie BeyDepartment for Molecular Plant Genetics, Max Planck Institute for Plant Breeding Research, 50829 Cologne, Germany.
Kurt Stüber
Kurt Fellenberg
Zsuzsanna Schwarz-Sommer
Hans Sommer
Heinz Saedler
Sabine Zachgo
Max Planck Institute for Plant Breeding Research · DEGerman Cancer Research Center · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The class B MADS box transcription factors DEFICIENS (DEF) and GLOBOSA (GLO) of Antirrhinum majus together control the organogenesis of petals and stamens. Toward an understanding of how the downstream molecular mechanisms controlled by DEF contribute to petal organogenesis, we conducted expression profiling experiments using macroarrays comprising >11,600 annotated Antirrhinum unigenes. First, four late petal developmental stages were compared with sepals. More than 500 ESTs were identified that comprise a large number of stage-specifically regulated genes and reveal a highly dynamic transcriptional regulation. For identification of DEF target genes that might be directly controlled by DEF, we took advantage of the temperature-sensitive def-101 mutant. To enhance the sensitivity of the profiling experiments, one petal developmental stage was selected, characterized by increased transcriptome changes that reflect the onset of cell elongation processes replacing cell division processes. Upon reduction of the DEF function, 49 upregulated and 52 downregulated petal target genes were recovered. Eight target genes were further characterized in detail by RT-PCR and in situ studies. Expression of genes responding rapidly toward an altered DEF activity is confined to different petal tissues, demonstrating the complexity of the DEF function regulating diverse basic processes throughout petal morphogenesis.

Indexed as

AntirrhinumCell DivisionDEFICIENS ProteinDown-RegulationFlowersGene Expression ProfilingGene Expression Regulation, DevelopmentalGene Expression Regulation, PlantGenes, RegulatorGene TargetingMutationOligonucleotide Array Sequence AnalysisOrganogenesisPlant ProteinsSignal TransductionTranscription FactorsDEFICIENS ProteinPlant ProteinsTranscription Factors

Identifiers

PMID15539471
PMCPMC535868
OpenAlexW2126040387

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.