Evidence map›Paper›PMID 15539344›Full record

ArticleProceedings. Biological sciences2004

Adaptive evolution of HoxA-11 and HoxA-13 at the origin of the uterus in mammals.

Vincent J Lynch, Jutta J Roth, Kazuhiko Takahashi, Casey W Dunn, Daisuke F Nonaka, Geffrey F Stopper, Günter P Wagner

Open access · greenAbstract readComparative Study
In one paragraph

Article in Proceedings. Biological sciences, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.0field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 36 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Mammalian-specific ectodermal enhancers control the expression ofProceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  5. Transposable elements contribute to the genomic response to insecticides inPhilosophical transactions of the Royal Society of London. Series B, Biological sciences · 2020
    Article
  6. Article
  7. Adaptive changes in the transcription factor HoxA-11 are essential for the evolution of pregnancy in mammals.Proceedings of the National Academy of Sciences of the United States of America · 2008
    Article
  8. Article
  9. Article
  10. The duplication of the Hox gene clusters in teleost fishes.Theory in biosciences = Theorie in den Biowissenschaften · 2004
    Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 2 countries.

Vincent J LynchDepartment of Ecology and Evolutionary Biology, Yale University, 165 Prospect Street, New Haven, CT 06551, USA. vincent.j.lynch@yale.edu
Jutta J Roth
Kazuhiko Takahashi
Casey W Dunn
Daisuke F Nonaka
Geffrey F Stopper
Günter P Wagner
Yale University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The evolution of morphological characters is mediated by the evolution of developmental genes. Evolutionary changes can either affect cis-regulatory elements, leading to differences in their temporal and spatial regulation, or affect the coding region. Although there is ample evidence for the importance of cis-regulatory evolution, it has only recently been shown that transcription factors do not remain functionally equivalent during evolution. These results suggest that the evolution of transcription factors may play an active role in the evolution of development. To test this idea we investigated the molecular evolution of two genes essential for the development and function of the mammalian female reproductive organs, HoxA-11 and HoxA-13. We predicted that if coding-region evolution plays an active role in developmental evolution, then these genes should have experienced adaptive evolution at the origin of the mammalian female reproductive system. We report the sequences of HoxA-11 from basal mammalian and amniote taxa and analyse HoxA-11 and HoxA-13 for signatures of adaptive molecular evolution. The data demonstrate that these genes were under strong positive (directional) selection in the stem lineage of therian and eutherian mammals, coincident with the evolution of the uterus and vagina. These results support the idea that adaptive evolution of transcription factors can be an integral part in the evolution of novel structures.

Indexed as

Evolution, MolecularAdaptation, BiologicalAnimalsBase SequenceDNA PrimersFemaleHomeodomain ProteinsHumansLikelihood FunctionsMammalsModels, GeneticMolecular Sequence DataPhylogenySequence Analysis, DNATranscription FactorsUterusDNA Primershomeobox protein HOXA13Homeodomain ProteinsHOXA11 protein, humanTranscription Factors

Identifiers

PMID15539344
PMCPMC1691855
OpenAlexW2078438220

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.