Evidence map›Paper›PMID 15526354›Full record

ArticleWorld journal of gastroenterology2004

Expression of Dnmt1, demethylase, MeCP2 and methylation of tumor-related genes in human gastric cancer.

Jing-Yuan Fang, Zhong-Hua Cheng, Ying-Xuan Chen, Rong Lu, Li Yang, Hong-Yin Zhu, Lun-Gen Lu

Open access · bronzeAbstract read
In one paragraph

Article in World journal of gastroenterology, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 46 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Article
  5. Epigenomic reprogramming in iAs-mediated carcinogenesis.Advances in pharmacology (San Diego, Calif.) · 2023
    Article
  6. Article
  7. Article
  8. Article
  9. Expression of DNMTs and MBD2 in GIST.Biomedical reports · 2013
    Article
  10. DNA and histone methylation in gastric carcinogenesis.World journal of gastroenterology · 2013
    Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. MYC and gastric adenocarcinoma carcinogenesis.World journal of gastroenterology · 2008
    Review
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Jing-Yuan FangShanghai Institute of Digestive Disease, Shanghai Second Medical University Renji Hospital, Shanghai 200001, China. jingyuanfang@yahoo.com
Zhong-Hua Cheng
Ying-Xuan Chen
Rong Lu
Li Yang
Hong-Yin Zhu
Lun-Gen Lu
Renji Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

aimTo explore the effect of DNA methyltransferase, demethylase and methyl-CpG binding protein MeCP2 on the expressions and methylation of hMSH2 and proto-oncogene in human gastric cancer.

methodsPaired samples of primary gastric cancer and corresponding para-cancerous, non-cancerous gastric mucosae were obtained from surgically resected specimens of 28 patients. Transcription levels of Dnmt1, mbd2, MeCP2, p16(INK4A), hMSH2 and c-myc were detected by using real-time PCR or RT-PCR. Promoter methylation of p16(INK4A), c-myc and hMSH2 genes was assayed by methylation-specific PCR (MSP) and sequencing (mapping). Their relationships were analyzed by Fisher's exact test using the software SPSS.

resultsThe average mRNA level of Dnmt1 gene from cancerous tissue was higher and that of mbd2 gene from cancerous tissue was lower than that from non-cancerous tissue, respectively. mbd2 was lower in cancerous tissue than in non-cancerous tissue in 14 (50.0%) of patients but higher in 3 cases (10.7%) of non-cancerous gastric tissue (P<0.001). c-myc expression was up-regulated in cancer tissues (P<0.05). The up-regulation of mbd2 was found in all patients with hypomethylated c-myc. The transcriptional levels of p16(INK4A) and MeCP2 genes did not display any difference between gastric cancerous and matched non-cancerous tissues. There were down-regulation and hypermethylation of hMSH2 in cancer tissues, and the hypermethylation of hMSH2 coexisted with down-regulated transcription. However, the transcription level of the above genes was not associated with biological behaviours of gastric cancers.

conclusionThe up-regulation of proto-oncogene may be the consequence of epigenetic control of gene expression by demethylase, and mbd2 is involved in the regulation of hMSH2 expression in human gastric cancer.

Indexed as

DNA MethylationAgedChromosomal Proteins, Non-HistoneCyclin-Dependent Kinase Inhibitor p16DNA-Binding ProteinsDNA (Cytosine-5-)-Methyltransferase 1DNA (Cytosine-5-)-MethyltransferasesFemaleGastric MucosaGene Expression Regulation, NeoplasticHumansMaleMethyl-CpG-Binding Protein 2Middle AgedMutS Homolog 2 ProteinPromoter Regions, GeneticChromosomal Proteins, Non-HistoneCyclin-Dependent Kinase Inhibitor p16DNA-Binding ProteinsDNA (Cytosine-5-)-Methyltransferase 1DNA (Cytosine-5-)-MethyltransferasesDNMT1 protein, humanMAS1 protein, humanMECP2 protein, humanMethyl-CpG-Binding Protein 2MSH2 protein, humanMutS Homolog 2 ProteinProto-Oncogene MasProto-Oncogene ProteinsProto-Oncogene Proteins c-mycRepressor ProteinsRNA, Messenger

Identifiers

PMID15526354
PMCPMC4576216
OpenAlexW2104660298

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.