Evidence map›Paper›PMID 15520882›Full record

ArticleMammalian genome : official journal of the International Mammalian Genome Society2004

Characterization of the dog Agouti gene and a nonagoutimutation in German Shepherd Dogs.

Julie A Kerns, J Newton, Tom G Berryere, Edward M Rubin, Jan-Fang Cheng, Sheila M Schmutz, Gregory S Barsh

Abstract read
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In one paragraph

Article in Mammalian genome : official journal of the International Mammalian Genome Society, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 49 papers.

0numbers the graph read from it
0cells of the map it votes in
49citing papers in PubMed
1.5field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

49 citing papers in PubMed, 120 citations in OpenAlex.

  1. Article
  2. Genetic testing predicts appearance but not behavior in dogs.Proceedings of the National Academy of Sciences of the United States of America · 2025
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  4. Whole exome sequencing as a screening tool in dogs: A pilot study.Computational and structural biotechnology journal · 2025
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  8. Veterinary sciences · 2022
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  10. Factors associated with canine skin extensibility in toy poodles.The Journal of veterinary medical science · 2022
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 3 countries.

Julie A KernsDepartments of Genetics and Pediatrics, Stanford University, Stanford, California 94305, USA.
J Newton
Tom G Berryere
Edward M Rubin
Jan-Fang Cheng
Sheila M Schmutz
Gregory S Barsh
Lawrence Berkeley National Laboratory · USPediatrics and Genetics · USUniversity of Saskatchewan · CAStanford University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The interaction between two genes, Agouti and Melanocortin-1 receptor ( Mc1r), produces diverse pigment patterns in mammals by regulating the type, amount, and distribution pattern of the two pigment types found in mammalian hair: eumelanin (brown/black) and pheomelanin (yellow/red). In domestic dogs ( Canis familiaris), there is a tremendous variation in coat color patterns between and within breeds; however, previous studies suggest that the molecular genetics of pigment-type switching in dogs may differ from that of other mammals. Here we report the identification and characterization of the Agouti gene from domestic dogs, predicted to encode a 131-amino-acid secreted protein 98% identical to the fox homolog, and which maps to chromosome CFA24 in a region of conserved linkage. Comparative analysis of the Doberman Pinscher Agouti cDNA, the fox cDNA, and 180 kb of Doberman Pinscher genomic DNA suggests that, as with laboratory mice, different pigment-type-switching patterns in the canine family are controlled by alternative usage of different promoters and untranslated first exons. A small survey of Labrador Retrievers, Greyhounds, Australian Shepherds, and German Shepherd Dogs did not uncover any polymorphisms, but we identified a single nucleotide variant in black German Shepherd Dogs predicted to cause an Arg-to-Cys substitution at codon 96, which is likely to account for recessive inheritance of a uniform black coat.

Indexed as

Agouti Signaling ProteinAmino Acid SubstitutionAnimalsBase SequenceDNA PrimersDogsExonsHair ColorIntercellular Signaling Peptides and ProteinsMelaninsMolecular Sequence DataPromoter Regions, GeneticReceptor, Melanocortin, Type 1Sequence Homology, Amino AcidSkin PigmentationAgouti Signaling ProteinDNA PrimerseumelaninIntercellular Signaling Peptides and ProteinsMelaninspheomelaninReceptor, Melanocortin, Type 1

Identifiers

PMID15520882
OpenAlexW2108588602

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.