Evidence map›Paper›PMID 15514064›Full record

ArticleGenetics2004

Single-locus latitudinal clines and their relationship to temperate adaptation in metabolic genes and derived alleles in Drosophila melanogaster.

Efe Sezgin, David D Duvernell, Luciano M Matzkin, Yihao Duan, Chen-Tseh Zhu, Brian C Verrelli, Walter F Eanes

Open access · bronzeAbstract read
In one paragraph

Article in Genetics, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 65 papers.

0numbers the graph read from it
0cells of the map it votes in
65citing papers in PubMed
2.9field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

65 citing papers in PubMed, 146 citations in OpenAlex.

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  10. Adaptive dynamics of cuticular hydrocarbons in Drosophila.Journal of evolutionary biology · 2017
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5 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Efe SezginDepartment of Ecology and Evolution, Stony Brook University, Stony Brook, New York 11794, USA.
David D Duvernell
Luciano M Matzkin
Yihao Duan
Chen-Tseh Zhu
Brian C Verrelli
Walter F Eanes
Stony Brook University · USArizona State University · USUniversity of Arizona · US

Funding

METABOLIC CONTROL AND MOLECULAR ADAPTATION IN DROSOPHILAR01GM045247 · NIGMS · STATE UNIVERSITY NEW YORK STONY BROOK · PI EANES, WALTER F. · 1991 to 2005
$1.3M
NIGMS NIH HHS GM-45247NIGMS NIH HHS R01 GM045247
6 · The paper itself

Abstract

We report a study in Drosophila melanogaster of latitudinal clines for 23 SNPs embedded in 13 genes (Pgi, Gapdh1, UGPase, Pglym78, Pglym87, Eno, Men, Gdh, Sod, Pgk, Mdh1, TreS, Treh) representing various metabolic enzymes. Our samples are from 10 populations spanning latitude from southern Florida to northern Vermont. Three new clines with latitude were detected. These are the amino acid polymorphisms in the NAD-dependent glutamate dehydrogenase (Gdh) and trehalase (Treh) genes, and a silent site polymorphism in the UDP-glucose pyrophosphorylase gene (UGPase). The result, when combined with the overall incidence and pattern of reports for six other genes (Adh, Gpdh, Pgm, G6pd, 6Pgd, Hex-C), presents a picture of latitudinal clines in metabolic genes prevalent around the branch point of competing pathways. For six of the seven amino acid polymorphisms showing significant latitudinal clines in North America, the derived allele is the one increasing with latitude, suggesting temperate adaptation. This is consistent with a model of an Afrotropical ancestral species adapting to temperate climates through selection favoring new mutations.

Indexed as

Polymorphism, GeneticAdaptation, PhysiologicalAllelesAmino Acid SubstitutionAnimalsDrosophila melanogasterFemaleInsect ProteinsMaleMutationNorth AmericaSelection, GeneticTemperatureInsect Proteins

Identifiers

PMID15514064
PMCPMC1448838
OpenAlexW2112397251

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.