Evidence map›Paper›PMID 15513937›Full record

ArticleThe Journal of physiology2005

Relations between substrate affinities and charge equilibration rates in the rat GABA cotransporter GAT1.

Andrea Soragna, Elena Bossi, Stefano Giovannardi, Rossana Pisani, Antonio Peres

Abstract read
In one paragraph

Article in The Journal of physiology, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Andrea SoragnaDepartment of Structural and Functional Biology, University of Insubria, Via Dunant 3, 21100 Varese, Italy.
Elena Bossi
Stefano Giovannardi
Rossana Pisani
Antonio Peres

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The relations between apparent affinity for substrates and operating rates have been investigated by two-electrode voltage clamp in the GABA transporter rGAT1 expressed in Xenopus oocytes. We have measured the transport current induced by the presence of GABA, as well as the charge equilibration rate in the absence of the neurotransmitter, in various experimental conditions known to affect the transporter characteristics. The apparent affinities for GABA and for Na(+) were also determined in the same conditions. Two pharmacological actions and three mutated isoforms have been examined. In all cases significant correlations were found between the charge equilibration rates and apparent affinities for both substrates. In particular in the transport process, the apparent affinity for GABA appears to be inversely related to the sum of the unidirectional charge equilibration rates (alpha+beta), while the Na(+) apparent affinity is directly related to their ratio (beta/alpha). Together these observations suggest a kinetic basis for GABA affinity with higher turnover rates resulting in lower affinity, and indicate that an efficient uptake requires a compromise between these two parameters.

Indexed as

AnimalsDNA, ComplementaryElectrophysiologyGABA AgentsGABA Plasma Membrane Transport Proteinsgamma-Aminobutyric AcidMembrane PotentialsMembrane Transport ProteinsNipecotic AcidsPatch-Clamp TechniquesPoint MutationRatsRecombinant ProteinsRNA, MessengerSodiumSolutionsDNA, ComplementaryGABA AgentsGABA Plasma Membrane Transport Proteinsgamma-Aminobutyric AcidMembrane Transport ProteinsN-(4,4-diphenyl-3-butenyl)nipecotic acidNipecotic AcidsRecombinant ProteinsRNA, MessengerSlc6a1 protein, ratSodiumSolutionsValproic Acid

Identifiers

PMID15513937
PMCPMC1665521

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.