Evidence map›Paper›PMID 15509761›Full record

ArticleThe Journal of neuroscience : the official journal of the Society for Neuroscience2004

Intrinsic noise in cultured hippocampal neurons: experiment and modeling.

Kamran Diba, Henry A Lester, Christof Koch

Abstract read
In one paragraph

Article in The Journal of neuroscience : the official journal of the Society for Neuroscience, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed.

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  8. Biological neurons act as generalization filters in reservoir computing.Proceedings of the National Academy of Sciences of the United States of America · 2023
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  18. Spontaneous olfactory receptor neuron activity determines follower cell response properties.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2012
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Kamran DibaSloan-Swartz Center for Theoretical Neurobiology, California Institute of Technology, Pasadena, California 91125, USA. diba@klab.caltech.edu
Henry A Lester
Christof Koch

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ion channels open and close stochastically. The fluctuation of these channels represents an intrinsic source of noise that affects the input-output properties of the neuron. We combined whole-cell measurements with biophysical modeling to characterize the intrinsic stochastic and electrical properties of single neurons as observed at the soma. We measured current and voltage noise in 18 d postembryonic cultured neurons from the rat hippocampus, at various subthreshold and near-threshold holding potentials in the presence of synaptic blockers. The observed current noise increased with depolarization, as ion channels were activated, and its spectrum demonstrated generalized 1/f behavior. Exposure to TTX removed a significant contribution from Na+ channels to the noise spectrum, particularly at depolarized potentials, and the resulting spectrum was now dominated by a single Lorentzian (1/f2) component. By replacing the intracellular K+ with Cs+, we demonstrated that a major portion of the observed noise was attributable to K+ channels. We compared the measured power spectral densities to a 1-D cable model of channel fluctuations based on Markov kinetics. We found that a somatic compartment, in combination with a single equivalent cylinder, described the effective geometry from the viewpoint of the soma. Four distinct channel populations were distributed in the membrane and modeled as Lorentzian current noise sources. Using the NEURON simulation program, we summed up the contributions from the spatially distributed current noise sources and calculated the total voltage and current noise. Our quantitative model reproduces important voltage- and frequency-dependent features of the data, accounting for the 1/f behavior, as well as the effects of various blockers.

Indexed as

AnimalsCells, CulturedElectric ImpedanceElectrophysiologyFourier AnalysisHippocampusIon ChannelsMarkov ChainsModels, NeurologicalNeuronsPatch-Clamp TechniquesPicrotoxinQuinoxalinesRatsRats, WistarSignal Processing, Computer-AssistedFG 9041Ion ChannelsPicrotoxinQuinoxalines

Identifiers

PMID15509761
PMCPMC6730144

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.