Evidence map›Paper›PMID 15507633›Full record

ArticleJournal of virology2004

Novel origin of the 1918 pandemic influenza virus nucleoprotein gene.

Ann H Reid, Thomas G Fanning, Thomas A Janczewski, Raina M Lourens, Jeffery K Taubenberger

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 58 papers.

0numbers the graph read from it
0cells of the map it votes in
58citing papers in PubMed
8.1field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

58 citing papers in PubMed, 120 citations in OpenAlex.

  1. Article
  2. Review
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  7. The 1918 Influenza Pandemic and Its Legacy.Cold Spring Harbor perspectives in medicine · 2020
    Review
  8. The Impact of COVID-19 on the Insurance Industry.International journal of environmental research and public health · 2020
    Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Review
  14. Back to the Future: Lessons Learned From the 1918 Influenza Pandemic.Frontiers in cellular and infection microbiology · 2018
    Review
  15. Article
  16. Article
  17. Article
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Ann H ReidArmed Forces Institute of Pathology, Department of Molecular Pathology, 1413 Research Blvd., Building 101, Rockville, MD 20850-3125, USA.
Thomas G Fanning
Thomas A Janczewski
Raina M Lourens
Jeffery K Taubenberger
Armed Forces Institute of Pathology · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The nucleoprotein (NP) gene of the 1918 pandemic influenza A virus has been amplified and sequenced from archival material. The NP gene is known to be involved in many aspects of viral function and to interact with host proteins, thereby playing a role in host specificity. The 1918 NP amino acid sequence differs at only six amino acids from avian consensus sequences, consistent with reassortment from an avian source shortly before 1918. However, the nucleotide sequence of the 1918 NP gene has more than 170 differences from avian strain consensus sequences, suggesting substantial evolutionary distance from known avian strain sequences. Both the gene and protein sequences of the 1918 NP fall within the mammalian clade upon phylogenetic analysis. The evolutionary distance of the 1918 NP sequences from avian and mammalian strain sequences is examined, using several different parameters. The results suggest that the 1918 strain did not retain the previously circulating human NP. Nor is it likely to have obtained its NP by reassortment with an avian strain similar to those now characterized. The results are consistent with the existence of a currently unknown host for influenza, with an NP similar to current avian strain NPs at the amino acid level but with many synonymous nucleotide differences, suggesting evolutionary isolation from the currently characterized avian influenza virus gene pool.

Indexed as

Amino Acid SequenceAnimalsBase SequenceHumansInfluenza, HumanMolecular Sequence DataNucleocapsid ProteinsNucleoproteinsOrthomyxoviridaePhylogenyRegression AnalysisRNA-Binding ProteinsSwineTime FactorsViral Core ProteinsNP protein, Influenza A virusNucleocapsid ProteinsNucleoproteinsRNA-Binding ProteinsViral Core Proteins

Identifiers

PMID15507633
PMCPMC525067
OpenAlexW2109747814

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.