Evidence map›Paper›PMID 15504856›Full record

ArticleAntimicrobial agents and chemotherapy2004

Mutations of Pneumocystis jirovecii dihydrofolate reductase associated with failure of prophylaxis.

Aimable Nahimana, Meja Rabodonirina, Jacques Bille, Patrick Francioli, Philippe M Hauser

Registry-linked trialOpen access · greenAbstract read
In one paragraph

Article in Antimicrobial agents and chemotherapy, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT06431958 (Droplet Digital PCR and PCR-free BIOSensors for the Detection of Resistance-associated SNPs in Pneumocystis Jirovecii), which is not on this map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT06431958 active not recruitingnot on this mapstarted 2024, after this paper: background citation

Droplet Digital PCR and PCR-free BIOSensors for the Detection of Resistance-associated SNPs in Pneumocystis Jirovecii

TypeobservationalSponsorUniversity Hospital, BrestRan2024 to 2026Enrolled300ConditionsPneumocystis Pneumonia
3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 95 citations in OpenAlex.

  1. Article
  2. Immune Responses toJournal of inflammation research · 2026
    Review
  3. Analysis of Mutations inInfection and drug resistance · 2024
    Article
  4. Article
  5. Highly ConservedAntimicrobial agents and chemotherapy · 2022
    Article
  6. Review
  7. Consensus Multilocus Sequence Typing Scheme forJournal of fungi (Basel, Switzerland) · 2020
    Review
  8. Recent Advances in the Diagnosis and Management ofTuberculosis and respiratory diseases · 2020
    Review
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. [Research progress on genes mutations related to sulfa drug resistance inZhejiang da xue xue bao. Yi xue ban = Journal of Zhejiang University. Medical sciences · 2017
    Review
  15. Article
  16. [Rapid diagnostic test for respiratory infections].Enfermedades infecciosas y microbiologia clinica · 2017
    Review
  17. A Quantitative Model to Estimate Drug Resistance in Pathogens.Journal of fungi (Basel, Switzerland) · 2016
    Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 3 countries.

Aimable NahimanaInstitute of Microbiology, University Hospital of Lausanne, Rue du Bugnon 48, 1011 Lausanne, Switzerland.
Meja Rabodonirina
Jacques Bille
Patrick Francioli
Philippe M Hauser
General Department of Preventive Medicine · VNHôpital de la Croix-Rousse · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Most drugs used for prevention and treatment of Pneumocystis jirovecii pneumonia target enzymes involved in the biosynthesis of folic acid, i.e., dihydropteroate synthase (DHPS) and dihydrofolate reductase (DHFR). Emergence of P. jirovecii drug resistance has been suggested by the association between failure of prophylaxis with sulfa drugs and mutations in DHPS. However, data on the occurrence of mutations in DHFR, the target of trimethoprim and pyrimethamine, are scarce. We examined polymorphisms in P. jirovecii DHFR from 33 patients diagnosed with P. jirovecii pneumonia who were receiving prophylaxis with a DHFR inhibitor (n = 15), prophylaxis without a DHFR inhibitor (n = 11), or no prophylaxis (n = 7). Compared to the wild-type sequence present in GenBank, 19 DHFR nucleotide substitution sites were found in 18 patients with 3 synonymous and 16 nonsynonymous mutations. Of 16 amino acid changes, 6 were located in positions conserved among distant organisms, and five of these six positions are probably involved in the putative active sites of the enzyme. Patients with failure of prophylaxis, including a DHFR inhibitor, were more likely to harbor nonsynonymous DHFR mutations than those who did not receive such prophylaxis (9 of 15 patients versus 2 of 18; P = 0.008). Analysis of the rate of nonsynonymous versus synonymous mutations was consistent with selection of amino acid substitutions in patients with failure of prophylaxis including a DHFR inhibitor. The results suggest that P. jirovecii populations may evolve under selective pressure from DHFR inhibitors, in particular pyrimethamine, and that DHFR mutations may contribute to P. jirovecii drug resistance.

Indexed as

AdultAmino Acid SequenceAnti-Bacterial AgentsBronchoalveolar Lavage FluidCloning, MolecularDNA, FungalDrug Resistance, FungalEvolution, MolecularFemaleFolic Acid AntagonistsHIV InfectionsHumansMaleMiddle AgedMolecular Sequence DataMutationAnti-Bacterial AgentsDNA, FungalFolic Acid AntagonistsPyrimethamineTetrahydrofolate DehydrogenaseTrimethoprim, Sulfamethoxazole Drug Combination

Identifiers

PMID15504856
PMCPMC525445
OpenAlexW2149868870

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.