Evidence map›Paper›PMID 15489524›Full record

ArticleGenetics2005

How the Rgt1 transcription factor of Saccharomyces cerevisiae is regulated by glucose.

Jeffrey A Polish, Jeong-Ho Kim, Mark Johnston

Open access · greenAbstract read
In one paragraph

Article in Genetics, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 57 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
57citing papers in PubMed, 1 pooled it
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

57 citing papers in PubMed, 1 synthesis or guideline pooled it, 95 citations in OpenAlex.

  1. Pooled it
  2. Glucose repression ofbioRxiv : the preprint server for biology · 2026
    Article
  3. Article
  4. Article
  5. Article
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  8. Review
  9. Review
  10. Review
  11. Review
  12. Deletion of theJournal of fungi (Basel, Switzerland) · 2022
    Article
  13. Article
  14. D-Xylose Sensing inInternational journal of molecular sciences · 2021
    Review
  15. Article
  16. Article
  17. Article
  18. Article
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  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Jeffrey A PolishDepartment of Genetics, Washington University, Saint Louis, Missouri 63110, USA.
Jeong-Ho Kim
Mark Johnston
Washington University in St. Louis · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Rgt1 is a transcription factor that regulates expression of HXT genes encoding glucose transporters in the yeast Saccharomyces cerevisiae. Rgt1 represses HXT gene expression in the absence of glucose; high levels of glucose cause Rgt1 to activate expression of HXT1. We identified four functional domains of Rgt1. A domain required for transcriptional repression (amino acids 210-250) is required for interaction of Rgt1 with the Ssn6 corepressor. Another region of Rgt1 (320-380) is required for normal transcriptional activation, and sequences flanking this region (310-320 and 400-410) regulate this function. A central region (520-830) and a short sequence adjacent to the zinc cluster DNA-binding domain (80-90) inhibit transcriptional repression when glucose is present. We found that this middle region of Rgt1 physically interacts with the N-terminal portion of the protein that includes the DNA-binding domain. This interaction is inhibited by the Rgt1 regulator Mth1, which binds to Rgt1. Our results suggest that Mth1 promotes transcriptional repression by Rgt1 by binding to it and preventing the intramolecular interaction, probably by preventing phosphorylation of Rgt1, thereby enabling Rgt1 to bind to DNA. Glucose induces HXT1 gene expression by causing Mth1 degradation, allowing Rgt1 phosphorylation, and leading to the intramolecular interaction that inhibits DNA binding of Rgt1.

Indexed as

Gene Expression Regulation, FungalAdaptor Proteins, Signal TransducingDNA-Binding ProteinsDNA, FungalDNA Mutational AnalysisFungal ProteinsGenes, FungalGlucoseGlucose Transport Proteins, FacilitativeIntracellular Signaling Peptides and ProteinsMembrane ProteinsModels, GeneticMonosaccharide Transport ProteinsMutagenesis, InsertionalNuclear ProteinsProtein Structure, TertiaryAdaptor Proteins, Signal TransducingCYC8 protein, S cerevisiaeDNA-Binding ProteinsDNA, FungalFungal ProteinsGlucoseGlucose Transport Proteins, FacilitativeHXT1 protein, S cerevisiaeIntracellular Signaling Peptides and ProteinsMembrane ProteinsMonosaccharide Transport ProteinsMTH1 protein, S cerevisiaeNuclear ProteinsRepressor ProteinsRGT1 protein, S cerevisiaeSaccharomyces cerevisiae ProteinsSTD1 protein, S cerevisiaeTrans-ActivatorsTranscription Factors

Identifiers

PMID15489524
PMCPMC1449106
OpenAlexW2161942543

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.