ArticleJournal of bacteriology2004
Use of in vivo expression technology to identify genes important in growth and survival of Pseudomonas fluorescens Pf0-1 in soil: discovery of expressed sequences with novel genetic organization.
Article in Journal of bacteriology, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.
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Who cites it
35 citing papers in PubMed.
- Article
- Rhizosphere plant-microbe interactions under water stress.Advances in applied microbiology · 2021Article
- Root Exudates Alter the Expression of Diverse Metabolic, Transport, Regulatory, and Stress Response Genes in RhizosphereFrontiers in microbiology · 2021Article
- Alginate genes are required for optimal soil colonization and persistence byAccess microbiology · 2019Article
- Disruption of the carA gene in Pseudomonas syringae results in reduced fitness and alters motility.BMC microbiology · 2016Article
- Article
- Identification of opsA, a gene involved in solute stress mitigation and survival in soil, in the polycyclic aromatic hydrocarbon-degrading bacterium Novosphingobium sp. strain LH128.Applied and environmental microbiology · 2014Article
- Importance of positioning for microbial evolution.Proceedings of the National Academy of Sciences of the United States of America · 2014Article
- Pleiotropic effects of GacA on Pseudomonas fluorescens Pf0-1 in vitro and in soil.Applied and environmental microbiology · 2013Article
- Colonization strategies of Pseudomonas fluorescens Pf0-1: activation of soil-specific genes important for diverse and specific environments.BMC microbiology · 2013Article
- Specific gene responses of Rhodococcus jostii RHA1 during growth in soil.Applied and environmental microbiology · 2012Article
- Regulation of polyphosphate kinase production by antisense RNA in Pseudomonas fluorescens Pf0-1.Applied and environmental microbiology · 2012Article
- Novel genes involved in Pseudomonas fluorescens Pf0-1 motility and biofilm formation.Applied and environmental microbiology · 2012Article
- Use of recombinase-based in vivo expression technology to characterize Enterococcus faecalis gene expression during infection identifies in vivo-expressed antisense RNAs and implicates the protease Eep in pathogenesis.Infection and immunity · 2012Article
- Transcriptional and antagonistic responses of Pseudomonas fluorescens Pf0-1 to phylogenetically different bacterial competitors.The ISME journal · 2011Article
- Specific responses of Salmonella enterica to tomato varieties and fruit ripeness identified by in vivo expression technology.PloS one · 2010Article
- Bacterial antisense RNAs: how many are there, and what are they doing?Annual review of genetics · 2010Review
- Proteomic detection of non-annotated protein-coding genes in Pseudomonas fluorescens Pf0-1.PloS one · 2009Article
- Requirement of polyphosphate by Pseudomonas fluorescens Pf0-1 for competitive fitness and heat tolerance in laboratory media and sterile soil.Applied and environmental microbiology · 2009Article
- Genomic and genetic analyses of diversity and plant interactions of Pseudomonas fluorescens.Genome biology · 2009Article
Corrections and comments
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Authors and funding
2 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Studies were undertaken to determine the genetic needs for the survival of Pseudomonas fluorescens Pf0-1, a gram-negative soil bacterium potentially important for biocontrol and bioremediation, in soil. In vivo expression technology (IVET) identified 22 genes with elevated expression in soil relative to laboratory media. Soil-induced sequences included genes with probable functions of nutrient acquisition and use, and of gene regulation. Ten sequences, lacking similarity to known genes, overlapped divergent known genes, revealing a novel genetic organization at those soil-induced loci. Mutations in three soil-induced genes led to impaired early growth in soil but had no impact on growth in laboratory media. Thus, IVET studies have identified sequences important for soil growth and have revealed a gene organization that was undetected by traditional laboratory approaches.
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