Evidence map›Paper›PMID 15489292›Full record

ArticleGenes & development2004

RNA polymerase I transcription and pre-rRNA processing are linked by specific SSU processome components.

Jennifer E G Gallagher, David A Dunbar, Sander Granneman, Brianna M Mitchell, Yvonne Osheim, Ann L Beyer, Susan J Baserga

Open access · diamondAbstract readComparative Study
In one paragraph

Article in Genes & development, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 154 papers.

0numbers the graph read from it
0cells of the map it votes in
154citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

154 citing papers in PubMed, 238 citations in OpenAlex.

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  12. Roles of ribosomal RNA in health and disease.Frontiers in RNA research · 2023
    Article
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  19. Artificial optimization of bambooFrontiers in plant science · 2022
    Article
  20. Review

94 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Jennifer E G GallagherDepartment of Molecular Biophysics and Biochemistry, Yale University School of Medicine, New Haven, Connecticut 06520-8024, USA.
David A Dunbar
Sander Granneman
Brianna M Mitchell
Yvonne Osheim
Ann L Beyer
Susan J Baserga
Yale University · USUniversity of Virginia · US

Funding

The Architecture and Function of RNPs Required for Ribosome BiogenesisR01GM052581 · NIGMS · YALE UNIVERSITY · PI BASERGA, SUSAN J · 2001 to 2013
$4.4M
ASSEMBLY, LOCALIZATION AND FUNCTION OF THE U3 SNRNPR29GM052581 · NIGMS · YALE UNIVERSITY · PI BASERGA, SUSAN J · 1996 to 2000
$120k
NIGMS NIH HHS GM 52581NIGMS NIH HHS R01 GM052581
6 · The paper itself

Abstract

Sequential events in macromolecular biosynthesis are often elegantly coordinated. The small ribosomal subunit (SSU) processome is a large ribonucleoprotein (RNP) required for processing of precursors to the small subunit RNA, the 18S, of the ribosome. We have found that a subcomplex of SSU processome proteins, the t-Utps, is also required for optimal rRNA transcription in vivo in the yeast Saccharomyces cerevisiae. The t-Utps are ribosomal chromatin (r-chromatin)-associated, and they exist in a complex in the absence of the U3 snoRNA. Transcription is required neither for the formation of the subcomplex nor for its r-chromatin association. The t-Utps are associated with the pre-18S rRNAs independent of the presence of the U3 snoRNA. This association may thus represent an early step in the formation of the SSU processome. Our results indicate that rRNA transcription and pre-rRNA processing are coordinated via specific components of the SSU processome.

Indexed as

RNA Processing, Post-TranscriptionalSaccharomyces cerevisiae ProteinsBlotting, WesternChromatinDNA PrimersImmunoprecipitationModels, GeneticPolymerase Chain ReactionRibonucleoproteinsRibosomesRNA Polymerase IRNA PrecursorsRNA, Ribosomal, 18SSaccharomyces cerevisiaeTranscription, GeneticChromatinDNA PrimersRibonucleoproteinsRNA Polymerase IRNA PrecursorsRNA, Ribosomal, 18SSaccharomyces cerevisiae Proteins

Identifiers

PMID15489292
PMCPMC529538
OpenAlexW1969138221

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.