Evidence map›Paper›PMID 15479887›Full record

ArticleAnnals of the rheumatic diseases2004

A gene expression signature for recent onset rheumatoid arthritis in peripheral blood mononuclear cells.

N Olsen, T Sokka, C L Seehorn, B Kraft, K Maas, J Moore, T M Aune

Registry-linked trialOpen access · bronzeAbstract readComparative Study
In one paragraph

Article in Annals of the rheumatic diseases, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT00037336 (Atherosclerosis in Rheumatoid Arthritis), which is not on this map. Cited by 56 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
56citing papers in PubMed, 2 pooled it
7.3field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT00037336 completednot on this map

Atherosclerosis in Rheumatoid Arthritis

TypeobservationalSponsorVanderbilt UniversityRan2001 to 2007ConditionsAtherosclerosis, Cardiovascular Diseases, Heart Diseases, Inflammation
3 · Its place in the literature

Who cites it

56 citing papers in PubMed, 2 syntheses or guidelines pooled it, 135 citations in OpenAlex.

  1. Pooled it
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  12. New Attempts to Define and Clarify Lupus.Current rheumatology reports · 2019
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

N OlsenDepartment of Medicine, Division of Rheumatology and Immunology, Vanderbilt University, Nashville TN 37232, USA. nancy.olsen@UTSouthwestern.edu
T Sokka
C L Seehorn
B Kraft
K Maas
J Moore
T M Aune
Vanderbilt University · USCentral Finland Health Care District · FI

Funding

Immunobiology of Blood and Vascular Systems Training ProgramT32HL069765 · NHLBI · VANDERBILT UNIVERSITY · PI HAWIGER, JACK J · 2002 to 2016
$6.5M
IFN GAMMA GENE REGULATION IN T CELLS AND NK CELLSR01AI044924 · NIAID · VANDERBILT UNIVERSITY MEDICAL CENTER · PI AUNE, THOMAS M. · 2000 to 2019
$5.8M
UV, APOPTOSIS, PROTEIN PHOSPHATASE AND SKIN DISEASEP30AR041943 · NIAMS · VANDERBILT UNIVERSITY · PI STRICKLIN, GEORGE PUTNAM · 1994 to 2008
$5.3M
ATHEROSCLEROSIS IN RAR01HL067964 · NHLBI · VANDERBILT UNIVERSITY · PI STEIN, CHARLES M. · 2001 to 2004
$1.3M
IDDM GENES AND INTERFERON GAMMAR01DK058765 · NIDDK · VANDERBILT UNIVERSITY · PI AUNE, THOMAS M. · 2001 to 2004
$856k
IFN-Gamma Gene Regulation in T Cells and NK CellsR56AI044924 · NIAID · VANDERBILT UNIVERSITY · PI AUNE, THOMAS M. · 2009 to 2009
$349k
NHLBI NIH HHS HL67964NHLBI NIH HHS HL69765NIAID NIH HHS AI05984NIAID NIH HHS AI44924NIAMS NIH HHS AR41943NIDDK NIH HHS DK58765
6 · The paper itself

Abstract

backgroundIn previous studies the presence of a distinct gene expression pattern has been shown in peripheral blood cells from patients with autoimmune disease.

objectiveTo determine whether other specific signatures might be used to identify subsets of these autoimmune diseases and whether gene expression patterns in early disease might identify pathogenetic factors.

methodsPeripheral blood mononuclear cells were acquired from patients with rheumatoid arthritis (RA) and analysed by microarrays containing over 4300 named human genes. Patients with RA for <2 years were compared with subjects with longstanding RA (average duration 10 years) and with patients with other immune or autoimmune diagnoses.

resultsCluster analyses permitted separation of the patients with early RA (ERA) from those with longstanding disease. Comparison with other patient groups suggested that the ERA signature showed some overlap with that seen in the normal immune response to viral antigen as well as with a subset of patients with systemic lupus erythematosus.

conclusionsThe ERA signature may reflect, in part, a response to an unknown infectious agent. Furthermore, shared features with some lupus patients suggest that common aetiological factors and pathogenetic pathways may be involved in these two autoimmune disorders.

Indexed as

Gene Expression ProfilingGene Expression RegulationAcute DiseaseArthritis, RheumatoidAutoimmune DiseasesChronic DiseaseFemaleHumansLeukocytes, MononuclearLupus Erythematosus, SystemicMaleMiddle AgedOligonucleotide Array Sequence AnalysisReverse Transcriptase Polymerase Chain Reaction

Identifiers

PMID15479887
PMCPMC1754808
OpenAlexW2157816493

What OpenQuestion holds

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.