Evidence map›Paper›PMID 15477590›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2004

The host response to smallpox: analysis of the gene expression program in peripheral blood cells in a nonhuman primate model.

Kathleen H Rubins, Lisa E Hensley, Peter B Jahrling, Adeline R Whitney, Thomas W Geisbert, John W Huggins, Art Owen, James W Leduc, Patrick O Brown, David A Relman

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 67 papers.

0numbers the graph read from it
0cells of the map it votes in
67citing papers in PubMed
4.3field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

67 citing papers in PubMed, 116 citations in OpenAlex.

  1. A comprehensive overview of monkeypox virus disease.Tropical medicine and health · 2026
    Review
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  14. Cytokine modulation correlates with severity of monkeypox disease in humans.Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology · 2015
    Article
  15. Review
  16. Review
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7 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 1 country.

Kathleen H RubinsDepartment of Microbiology and Immunology, Stanford University, Stanford, CA 94305, USA.
Lisa E Hensley
Peter B Jahrling
Adeline R Whitney
Thomas W Geisbert
John W Huggins
Art Owen
James W Leduc
Patrick O Brown
David A Relman
United States Army Medical Research Institute of Infectious Diseases · USCenters for Disease Control and Prevention · USHoward Hughes Medical Institute · USStanford University · USNational Institutes of Health · US

Funding

Host responses to smallpox and monkeypoxR01AI054922 · NIAID · STANFORD UNIVERSITY · PI RELMAN, DAVID ARNOLD · 2003 to 2006
$1.3M
NIAID NIH HHS AI54922NIAID NIH HHS R01 AI054922
6 · The paper itself

Abstract

Smallpox has played an unparalleled role in human history and remains a significant potential threat to public health. Despite the historical significance of this disease, we know little about the underlying pathophysiology or the virulence mechanisms of the causative agent, variola virus. To improve our understanding of variola pathogenesis and variola-host interactions, we examined the molecular and cellular features of hemorrhagic smallpox in cynomolgus macaques. We used cDNA microarrays to analyze host gene expression patterns in sequential blood samples from each of 22 infected animals. Variola infection elicited striking and temporally coordinated patterns of gene expression in peripheral blood. Of particular interest were features that appear to represent an IFN response, cell proliferation, immunoglobulin gene expression, viral dose-dependent gene expression patterns, and viral modulation of the host immune response. The virtual absence of a tumor necrosis factor alpha/NF-kappaB-activated transcriptional program in the face of an overwhelming systemic infection suggests that variola gene products may ablate this response. These results provide a detailed picture of the host transcriptional response during smallpox infection, and may help guide the development of diagnostic, therapeutic, and prophylactic strategies.

Indexed as

AnimalsBlood CellsCell CycleCell DivisionDisease Models, AnimalGene Expression ProfilingInterferonsLymphocytesMacaca fascicularisNF-kappa BOligonucleotide Array Sequence AnalysisSmallpoxTumor Necrosis Factor-alphaInterferonsNF-kappa BTumor Necrosis Factor-alpha

Identifiers

PMID15477590
PMCPMC523453
OpenAlexW1663779312

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.