Evidence map›Paper›PMID 15475581›Full record

ArticleBiophysical journal2005

High frequency dynamics in hemoglobin measured by magnetic relaxation dispersion.

Ken Victor, Alexandra Van-Quynh, Robert G Bryant

Abstract read
In one paragraph

Article in Biophysical journal, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Water-proton-spin-lattice-relaxation dispersion of paramagnetic protein solutions.Journal of magnetic resonance (San Diego, Calif. : 1997) · 2011
    Article
  3. Article
  4. Article
  5. Hemoglobin senses body temperature.European biophysics journal : EBJ · 2009
    Article
  6. Article
  7. Noise and functional protein dynamics.Biophysical journal · 2005
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Ken VictorChemistry Department, University of Virginia, Charlottesville, Virginia, USA.
Alexandra Van-Quynh
Robert G Bryant

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The magnetic relaxation dispersion profiles for formate, acetate, and water protons are reported for aqueous solutions of hemoglobin singly and doubly labeled with a nitroxide and mercury(II) ion at cysteines at beta-93. Using two spin labels, one nuclear and one electron spin, a long intramolecular vector is defined between the two beta-93 positions in the protein. The paramagnetic contributions to the observed 1H spin-lattice relaxation rate constant are isolated from the magnetic relaxation dispersion profiles obtained on a dual-magnet apparatus that provides spectral density functions characterizing fluctuations sensed by intermoment dipolar interactions in the time range from the tens of microseconds to approximately 1 ps. Both formate and acetate ions are found to bind specifically within 5 angstroms of the beta-93 spin-label position and the relaxation dispersion has inflection points corresponding to correlation times of 30 ps and 4 ns for both ions. The 4-ns motion is identified with exchange of the anions from the site, whereas the 30-ps correlation time is identified with relative motions of the spin label and the bound anion in the protein environment close to beta-93. The magnetic field dependence of the paramagnetic contributions in both cases is well described by a simple Lorentzian spectral density function; no peaks in the spectral density function are observed. Therefore, the high frequency motions of the protein monitored by the intramolecular vector defined by the electron and nuclear spin are well characterized by a stationary random function of time. Attempts to examine long vector fluctuations by employing electron spin and nuclear spin double-labeling techniques did not yield unambiguous characterization of the high frequency motions of the vector between beta-93 positions on different chains.

Indexed as

AcetatesAnimalsBinding SitesBiophysicsCattleCysteineDeuterium OxideElectronsElectron Spin Resonance SpectroscopyFormatesHemoglobinsIonsLigandsMagnetic Resonance SpectroscopyMagneticsMercuryAcetatesCysteineDeuterium OxideFormatesHemoglobinsIonsLigandsMercuryMethemoglobinNitric OxideOxygenProteinsProtonsSpin LabelsWater

Identifiers

PMID15475581
PMCPMC1305021

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.