Evidence map›Paper›PMID 15467980›Full record

ArticleAmerican journal of human genetics2004

Phylogeny of mitochondrial DNA macrohaplogroup N in India, based on complete sequencing: implications for the peopling of South Asia.

Malliya Gounder Palanichamy, Chang Sun, Suraksha Agrawal, Hans-Jürgen Bandelt, Qing-Peng Kong, Faisal Khan, Cheng-Ye Wang, Tapas Kumar Chaudhuri, Venkatramana Palla, Ya-Ping Zhang

Abstract readComparative Study
In one paragraph

Article in American journal of human genetics, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 130 papers, 6 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
130citing papers in PubMed, 6 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

130 citing papers in PubMed, 6 syntheses or guidelines pooled it.

  1. Pooled it
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  14. Phylogeographic history of mitochondrial haplogroup J in Scandinavia.American journal of biological anthropology · 2023
    Article
  15. Article
  16. Sequencing and comparative genome analysis of three Indians.Mammalian genome : official journal of the International Mammalian Genome Society · 2021
    Article
  17. Origin and Spread of the ALDH2 Glu504Lys Allele.Phenomics (Cham, Switzerland) · 2021
    Review
  18. Article
  19. Article
  20. Article

70 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Malliya Gounder PalanichamyLaboratory for Conservation and Utilization of Bioresources, Yunnan University, Chinese Academy of Sciences, Kunming, China.
Chang Sun
Suraksha Agrawal
Hans-Jürgen Bandelt
Qing-Peng Kong
Faisal Khan
Cheng-Ye Wang
Tapas Kumar Chaudhuri
Venkatramana Palla
Ya-Ping Zhang

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

To resolve the phylogeny of the autochthonous mitochondrial DNA (mtDNA) haplogroups of India and determine the relationship between the Indian and western Eurasian mtDNA pools more precisely, a diverse subset of 75 macrohaplogroup N lineages was chosen for complete sequencing from a collection of >800 control-region sequences sampled across India. We identified five new autochthonous haplogroups (R7, R8, R30, R31, and N5) and fully characterized the autochthonous haplogroups (R5, R6, N1d, U2a, U2b, and U2c) that were previously described only by first hypervariable segment (HVS-I) sequencing and coding-region restriction-fragment-length polymorphism analysis. Our findings demonstrate that the Indian mtDNA pool, even when restricted to macrohaplogroup N, harbors at least as many deepest-branching lineages as the western Eurasian mtDNA pool. Moreover, the distribution of the earliest branches within haplogroups M, N, and R across Eurasia and Oceania provides additional evidence for a three-founder-mtDNA scenario and a single migration route out of Africa.

Indexed as

Genetics, PopulationPhylogenyBase SequenceDNA, MitochondrialEmigration and ImmigrationEthnicityGeographyHaplotypesHumansIndiaMolecular Sequence DataSequence Analysis, DNADNA, Mitochondrial

Identifiers

PMID15467980
PMCPMC1182158

What OpenQuestion holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.