Evidence map›Paper›PMID 15466592›Full record

ArticleNucleic acids research2004

DNA double strand break repair in human bladder cancer is error prone and involves microhomology-associated end-joining.

Johanne Bentley, Christine P Diggle, Patricia Harnden, Margaret A Knowles, Anne E Kiltie

Open access · bronzeAbstract read
In one paragraph

Article in Nucleic acids research, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 69 papers.

0numbers the graph read from it
0cells of the map it votes in
69citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

69 citing papers in PubMed, 119 citations in OpenAlex.

  1. Review
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  13. Review
  14. Establishment of a Transformation CoupledFrontiers in oncology · 2020
    Article
  15. Review
  16. Human papillomavirus 16 promotes microhomology-mediated end-joining.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  17. Rewiring E2F1 with classical NHEJ via APLF suppression promotes bladder cancer invasiveness.Journal of experimental & clinical cancer research : CR · 2019
    Article
  18. Review
  19. Article
  20. RadiosensitizationMolecular cancer therapeutics · 2018
    Article

9 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Johanne BentleyCancer Research UK Clinical Centre, St James's University Hospital, Leeds, LS9 7TF, UK. J.Bentley@cancermed.leeds.ac.uk
Christine P Diggle
Patricia Harnden
Margaret A Knowles
Anne E Kiltie
Cancer Research UK · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In human cells DNA double strand breaks (DSBs) can be repaired by the non-homologous end-joining (NHEJ) pathway. In a background of NHEJ deficiency, DSBs with mismatched ends can be joined by an error-prone mechanism involving joining between regions of nucleotide microhomology. The majority of joins formed from a DSB with partially incompatible 3' overhangs by cell-free extracts from human glioblastoma (MO59K) and urothelial (NHU) cell lines were accurate and produced by the overlap/fill-in of mismatched termini by NHEJ. However, repair of DSBs by extracts using tissue from four high-grade bladder carcinomas resulted in no accurate join formation. Junctions were formed by the non-random deletion of terminal nucleotides and showed a preference for annealing at a microhomology of 8 nt buried within the DNA substrate; this process was not dependent on functional Ku70, DNA-PK or XRCC4. Junctions were repaired in the same manner in MO59K extracts in which accurate NHEJ was inactivated by inhibition of Ku70 or DNA-PK(cs). These data indicate that bladder tumour extracts are unable to perform accurate NHEJ such that error-prone joining predominates. Therefore, in high-grade tumours mismatched DSBs are repaired by a highly mutagenic, microhomology-mediated, alternative end-joining pathway, a process that may contribute to genomic instability observed in bladder cancer.

Indexed as

DNA DamageDNA RepairAntigens, NuclearBase SequenceCell Line, TumorDNA-Activated Protein KinaseDNA-Binding ProteinsHumansKu AutoantigenNuclear ProteinsProtein Serine-Threonine KinasesRecombination, GeneticSequence HomologyUreteral NeoplasmsUrinary Bladder NeoplasmsAntigens, NuclearDNA-Activated Protein KinaseDNA-Binding ProteinsKu AutoantigenNuclear ProteinsPRKDC protein, humanProtein Serine-Threonine KinasesXRCC4 protein, humanXrcc6 protein, human

Identifiers

PMID15466592
PMCPMC521655
OpenAlexW2047631844

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.