Evidence map›Paper›PMID 15465926›Full record

ArticleMolecular pharmacology2005

Alternative promoters determine tissue-specific expression profiles of the human microsomal epoxide hydrolase gene (EPHX1).

Shun-Hsin Liang, Christopher Hassett, Curtis J Omiecinski

Open access · greenAbstract read
In one paragraph

Article in Molecular pharmacology, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
  2. eLife · 2021
    Article
  3. The Multifaceted Role of Epoxide Hydrolases in Human Health and Disease.International journal of molecular sciences · 2020
    Review
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Shun-Hsin LiangCenter of Molecular Toxicology, 115 Henning, Pennsylvania State University, University Park, PA 16802, USA.
Christopher Hassett
Curtis J Omiecinski
Pennsylvania State University · US

Funding

Interindividual Variability in Human Microsomal Epoxide HydrolaseR01ES016358 · NIEHS · PENNSYLVANIA STATE UNIVERSITY, THE · PI OMIECINSKI, CURTIS J · 2009 to 2012
$1.3M
MOLECULAR TOXICOLOGY OF EPOXIDE HYDROLASER01ES004978 · NIEHS · UNIVERSITY OF WASHINGTON · PI OMIECINSKI, CURTIS J · 1989 to 2002
$646k
NIEHS NIH HHS ES 04978NIEHS NIH HHS R01 ES004978NIEHS NIH HHS R01 ES016358
6 · The paper itself

Abstract

Microsomal epoxide hydrolase (EPHX1) catalyzes hydration reactions that determine the cellular disposition of reactive epoxide derivatives. Whereas the previously defined EPHX1 exon 1 sequence (E1) is derived from a promoter proximal to exon 2 of the EPHX1 coding region, in this investigation, we identified an alternative EPHX1 exon 1 sequence, E1-b, originating from a gene promoter localized approximately 18.5 kb upstream of exon 2. Northern hybridizations demonstrated that the E1-b variant is widely expressed and that the E1-b promoter functions as the primary driver of EPHX1 expression in human tissues. In contrast, the E1 promoter directs expression only in the liver. To examine the basis for liver-specific usage of the E1 promoter, we identified several potential cis-regulatory elements that included GATA (-110/-105) and hepatocyte nuclear factor 3 (HNF3) (-96/-88) motifs. GATA-4 was the principal GATA family member interacting with its respective motif, whereas both HNF3alpha and HNF3beta were capable of interacting with the HNF3 element. GATA-4 and HNF3alpha/HNF3beta DNA binding complexes were enriched in hepatic cells. Site-directed mutagenesis and transactivation analyses of the E1 promoter revealed that GATA-4 is probably a principal factor that regulates liver-specific expression of the E1 variant, with HNF3alpha and HNF3beta acting to negatively regulate GATA-4 function in hepatic cells.

Indexed as

Gene Expression Regulation, EnzymologicPromoter Regions, GeneticAlternative SplicingBase SequenceCarcinoma, HepatocellularCell Line, TumorEpoxide HydrolasesExonsGene Expression ProfilingGenes, ReporterHumansLiver NeoplasmsMicrosomes, LiverMolecular Sequence DataPlasmidsRNA, MessengerEpoxide HydrolasesRNA, Messenger

Identifiers

PMID15465926
PMCPMC4091896
OpenAlexW2130673756

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.