Evidence map›Paper›PMID 15465874›Full record

ArticleBiophysical journal2004

Two complementary, local excitation, global inhibition mechanisms acting in parallel can explain the chemoattractant-induced regulation of PI(3,4,5)P3 response in dictyostelium cells.

Lan Ma, Chris Janetopoulos, Liu Yang, Peter N Devreotes, Pablo A Iglesias

Open access · bronzeAbstract readComparative StudyEvaluation Study
In one paragraph

Article in Biophysical journal, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 78 papers.

0numbers the graph read from it
0cells of the map it votes in
78citing papers in PubMed
5.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

78 citing papers in PubMed, 155 citations in OpenAlex.

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  13. Mechanisms of Cell Polarization.Current opinion in systems biology · 2017
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  17. Review
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  20. Article

18 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Lan MaDepartment of Electrical and Computer Engineering, Johns Hopkins University, Baltimore, Maryland 21218, USA.
Chris Janetopoulos
Liu Yang
Peter N Devreotes
Pablo A Iglesias
Johns Hopkins University · US

Funding

PHS HHS 28007PHS HHS 34933PHS HHS 71920
6 · The paper itself

Abstract

Chemotaxing cells, such as Dictyostelium and mammalian neutrophils, sense shallow chemoattractant gradients and respond with highly polarized changes in cell morphology and motility. Uniform chemoattractant stimulation induces the transient translocations of several downstream signaling components, including phosphoinositide 3-kinase (PI3K), tensin homology protein (PTEN), and phosphatidylinositol 3,4,5-trisphosphate (PI(3,4,5)P3). In contrast, static spatial chemoattractant gradients elicit the persistent, amplified localization of these molecules. We have proposed a model in which the response to chemoattractant is regulated by a balance of a local excitation and a global inhibition, both of which are controlled by receptor occupancy. This model can account for both the transient and spatial responses to chemoattractants, but alone does not amplify the external gradient. In this article, we develop a model in which parallel local excitation, global inhibition mechanisms control the membrane binding of PI3K and PTEN. Together, the action of these enzymes induces an amplified PI(3,4,5)P3 response that agrees quantitatively with experimentally obtained plekstrin homology-green fluorescent protein distributions in latrunculin-treated cells. We compare the model's performance with that of several mutants in which one or both of the enzymes are disrupted. The model accounts for the observed response to multiple, simultaneous chemoattractant cues and can recreate the cellular response to combinations of temporal and spatial stimuli. Finally, we use the model to predict the response of a cell where only a fraction is stimulated by a saturating dose of chemoattractant.

Indexed as

Models, BiologicalAnimalsChemotaxisComputer SimulationCyclic AMPDictyosteliumDose-Response Relationship, DrugEnzyme ActivationEnzyme InhibitorsPhosphatidylinositol 3-KinasesPhosphatidylinositolsPhosphoric Monoester HydrolasesPTEN PhosphohydrolaseTumor Suppressor ProteinsCyclic AMPEnzyme InhibitorsPhosphatidylinositol 3-KinasesPhosphatidylinositolsPhosphoric Monoester HydrolasesPIP3-APBPTEN PhosphohydrolaseTumor Suppressor Proteins

Identifiers

PMID15465874
PMCPMC1304889
OpenAlexW2133493253

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.