Evidence map›Paper›PMID 15454531›Full record

ArticleGenetics2004

Division of labor among the yeast Sol proteins implicated in tRNA nuclear export and carbohydrate metabolism.

D R Stanford, M L Whitney, R L Hurto, D M Eisaman, W-C Shen, A K Hopper

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in Genetics, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
0.8field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 43 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Review
  6. A single NScientific reports · 2018
    Article
  7. Nup100 regulatesRNA (New York, N.Y.) · 2017
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. tRNA biology charges to the front.Genes & development · 2010
    Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

D R StanfordDepartment of Biochemistry and Molecular Biology, Pennsylvania State University College of Medicine, Hershey 17033, USA.
M L Whitney
R L Hurto
D M Eisaman
W-C Shen
A K Hopper
Pennsylvania State University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

SOL1, the founding member of the S. cerevisiae SOL family, was previously identified as a multi-copy suppressor of the los1 defect in tRNA-mediated nonsense suppression. Here we report that the four-member SOL family is not essential and that individual family members appear to have distinct functions. SOL1-SOL4 are homologous to genes encoding 6-phosphogluconolactonase (6Pgl) involved in the pentose phosphate pathway. Both Sol3p and Sol4p affect this activity. However, Sol4p does not act as a los1 multi-copy suppressor. In contrast, neither Sol1p nor Sol2p, both of which correct the los1 defect in nonsense suppression, possess detectable 6Pgl activity. Rather, Sol1p and Sol2p appear to function in tRNA nuclear export as sol1 and sol2 mutants possess elevated levels of nuclear tRNA. Members of the Sol protein family appear to have different subcellular distributions. Thus, Sol3p and Sol4p likely function in carbohydrate metabolism, while Sol1p and Sol2p appear to have roles in tRNA function and nuclear export, thereby defining an unusual protein family whose individual members are biochemically distinct and spatially dispersed.

Indexed as

Carbohydrate MetabolismActive Transport, Cell NucleusAmino Acid SequenceBase SequenceCarboxylic Ester HydrolasesCell NucleusCluster AnalysisComputational BiologyDNA PrimersFluorescent Antibody TechniqueIn Situ Hybridization, FluorescenceMolecular Sequence DataMultigene FamilyNuclear Pore Complex ProteinsPlasmidsPolymerase Chain Reaction6-phosphogluconolactonaseCarboxylic Ester HydrolasesDNA PrimersLos1 protein, S cerevisiaeNuclear Pore Complex ProteinsRNA, TransferSaccharomyces cerevisiae Proteins

Identifiers

PMID15454531
PMCPMC1448090
OpenAlexW1974009581

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.