Evidence map›Paper›PMID 15454529›Full record

ArticleGenetics2004

Increase in Ty1 cDNA recombination in yeast sir4 mutant strains at high temperature.

Sarah J Radford, Meredith L Boyle, Catherine J Sheely, Joel Graham, Daniel P Haeusser, Leigh Zimmerman, Jill B Keeney

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in Genetics, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.1field-weighted citation impact, top 52% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Sarah J RadfordDepartment of Biology, Juniata College, Huntingdon, Pennsylvania 16652, USA.
Meredith L Boyle
Catherine J Sheely
Joel Graham
Daniel P Haeusser
Leigh Zimmerman
Jill B Keeney
Juniata College · USUniversity of North Carolina at Chapel Hill · US

Funding

The role of SIR4 in Ty1 retrotranspositionR15GM065848 · NIGMS · JUNIATA COLLEGE · PI KEENEY, JILL B · 2002 to 2002
$124k
NOVEL HOST GENES AFFECTING TRANSPOSITIONR15GM054291 · NIGMS · JUNIATA COLLEGE · PI KEENEY, JILL B · 1996 to 1998
–
NIGMS NIH HHS GM54291NIGMS NIH HHS GM65848NIGMS NIH HHS R15 GM065848
6 · The paper itself

Abstract

Transposition of the Ty1 element of the yeast Saccharomyces cerevisiae is temperature sensitive. We have identified a null allele of the silent information regulator gene SIR4 as a host mutant that allows for transposition at high temperature. We show that the apparent increase in transposition activity in sir4 mutant strains at high temperature is dependent on the RAD52 gene and is thus likely resulting from an increase in Ty1 cDNA recombination, rather than in IN-mediated integration. General cellular recombination is not increased at high temperature, suggesting that the increase in recombination at high temperature in sir4 mutants is specific for Ty1 cDNA. Additionally, this high-temperature Ty1 recombination was found to be dependent on functional Sir2p and Sir3p. We speculate that the increase in recombination seen in sir4 mutants at high temperature may be due to changes in chromatin structure or Ty1 interactions with chromosomal structures resulting in higher recombination rates.

Indexed as

TemperatureDNA-Binding ProteinsDNA, ComplementaryGene ComponentsGene LibraryHistone DeacetylasesImmunoblottingMutationOligonucleotidesPlasmidsRad52 DNA Repair and Recombination ProteinRecombination, GeneticRetroelementsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSequence Analysis, DNADNA-Binding ProteinsDNA, ComplementaryHistone DeacetylasesOligonucleotidesRad52 DNA Repair and Recombination ProteinRAD52 protein, S cerevisiaeRetroelementsSaccharomyces cerevisiae ProteinsSilent Information Regulator Proteins, Saccharomyces cerevisiaeSIR2 protein, S cerevisiaeSIR3 protein, S cerevisiaeSIR4 protein, S cerevisiaeSirtuin 2Sirtuins

Identifiers

PMID15454529
PMCPMC1448086
OpenAlexW2032830921

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.