Evidence map›Paper›PMID 15452198›Full record

ArticleThe Journal of general physiology2004

Determinants of anion permeation in the second transmembrane domain of the mouse bestrophin-2 chloride channel.

Zhiqiang Qu, Criss Hartzell

Open access · bronzeAbstract readComparative StudyEvaluation Study
In one paragraph

Article in The Journal of general physiology, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 72 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. The TMEM16A channel mediates the fast polyspermy block inThe Journal of general physiology · 2018
    Article
  5. Distinct regions that control ion selectivity and calcium-dependent activation in the bestrophin ion channel.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
  6. Article
  7. Article
  8. Stoichiometry and specific assembly of Best ion channels.Proceedings of the National Academy of Sciences of the United States of America · 2014
    Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Bestrophins and retinopathies.Pflugers Archiv : European journal of physiology · 2010
    Review
  14. Article
  15. Bestrophin-1 encodes for the Ca2+-activated anion channel in hippocampal astrocytes.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2009
    Article
  16. Article
  17. Functional properties of murine bestrophin 1 channel.Biochemical and biophysical research communications · 2009
    Article
  18. Article
  19. Functional assembly and purinergic activation of bestrophins.Pflugers Archiv : European journal of physiology · 2009
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Zhiqiang QuDepartment of Cell Biology, Center for Neurodegenerative Disease, Emory University School of Medicine, Atlanta, GA 30322, USA.
Criss Hartzell
Emory University · US

Funding

Retinal Degeneration and Chloride ChannelsR01EY014852 · NEI · EMORY UNIVERSITY · PI HARTZELL, H. CRISS · 2003 to 2020
$5.7M
REGULATION OF CALCIUM-ACTIVATED CHLORIDE CHANNELSR01GM060448 · NIGMS · EMORY UNIVERSITY · PI HARTZELL, H. CRISS · 2000 to 2014
$3.7M
NEI NIH HHS EY014852NEI NIH HHS R01 EY014852NIGMS NIH HHS GM60448NIGMS NIH HHS R01 GM060448
6 · The paper itself

Abstract

Bestrophins have been proposed to constitute a new family of Cl channels that are activated by cytosolic Ca. We showed previously that mutation of serine-79 to cysteine in mouse bestrophin-2 (mBest2) altered the relative permeability and conductance to SCN. In this paper, we have overexpressed various mutant constructs of mBest2 in HEK-293 cells to explore the contributions to anion selectivity of serine-79 and other amino acids (V78, F80, G83, F84, V86, and T87) located in the putative second transmembrane domain (TMD2). Residues selected for mutagenesis were distributed throughout TMD2, but mutations at all positions changed the selectivity. The effects on selectivity were rather modest. Replacement of residues 78, 79, 80, 83, 84, 86, or 87 with cysteine had similar effects: the permeability of the channel to SCN relative to Cl (PSCN/PCl) was decreased three- to fourfold and the relative SCN conductance (GSCN/GCl) was increased five- to tenfold. Side chains at positions 78 and 80 appeared to be situated close to the permeant anion, because the electrostatic charge at these positions affected permeation in specific ways. The effects of charged sulfhydryl-reactive MTS reagents were the opposite in the V78C and F80C mutants and the effects were partially mimicked by substitution of F80 with charged amino acids. In S79T, switching from Cl to SCN caused slow changes in GSCN/GCl (tau = 16.6 s), suggesting that SCN binding to the channel altered channel gating as well as conductance. The data in this paper and other data support a model in which TMD2 plays an important role in forming the bestrophin pore. We suggest that the major determinant in anion permeation involves partitioning of the permeant anion into an aqueous pore whose structural features are rather flexible. Furthermore, anion permeation and gating may be linked.

Indexed as

Models, BiologicalAmino Acid SubstitutionAnimalsAnionsBestrophinsCell LineCell Membrane PermeabilityChloride ChannelsChloridesComputer SimulationHumansIon Channel GatingMembrane PotentialsMiceMutagenesis, Site-DirectedProtein Structure, TertiaryAnionsBest2 protein, mouseBestrophinsChloride ChannelsChloridesRecombinant Proteins

Identifiers

PMID15452198
PMCPMC2233901
OpenAlexW2158091508

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.