Evidence map›Paper›PMID 15449173›Full record

ArticleHuman genetics2004

Mutational analysis of OGG1, MYH, MTH1 in FAP, HNPCC and sporadic colorectal cancer patients: R154H OGG1 polymorphism is associated with sporadic colorectal cancer patients.

I-J Kim, J-L Ku, H C Kang, J-H Park, K-A Yoon, Y Shin, H-W Park, S G Jang, S-K Lim, S Y Han and 7 more

Abstract read
PubMed Publisher
In one paragraph

Article in Human genetics, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
2.5field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 47 citations in OpenAlex.

  1. Review
  2. Carrier Frequency and Incidence ofAnnals of laboratory medicine · 2025
    Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. In Vitro Fluorogenic Real-Time Assay of the Repair of Oxidative DNA Damage.Chembiochem : a European journal of chemical biology · 2015
    Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. MUTYH Associated Polyposis (MAP).Current genomics · 2008
    Article
  16. Review
  17. Article
  18. Article
  19. Biology of SNU cell lines.Cancer research and treatment · 2005
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 2 institutions in 1 country.

I-J KimKorean Hereditary Tumor Registry, Cancer Research Institute and Cancer Research Center, Seoul National University, Seoul, Korea.
J-L Ku
H C Kang
J-H Park
K-A Yoon
Y Shin
H-W Park
S G Jang
S-K Lim
S Y Han
Y-K Shin
M R Lee
S-Y Jeong
H-R Shin
J S Lee
W-H Kim
J-G Park
Seoul National University · KRNational Cancer Center · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

MYH, OGG1 and MTH1 are members of base excision repair (BER) families, and MYH germline mutations were recently identified in patients with multiple adenomas or familial adenomatous polyposis (FAP). A total of 20 APC-negative Korean FAP patients were analyzed for OGG1, MYH and MTH1 germline mutations. A total of 19 hereditary nonpolyposis colorectal cancer (HNPCC), 86 suspected HNPCC, and 246 sporadic colorectal cancer cases were investigated for OGG1 and MYH mutations. A total of 14 R154H OGG1 polymorphisms were identified in hereditary, sporadic colorectal cancers, and normal controls. For the case-control analysis of OGG1 R154H, a total of 625 hereditary or sporadic colorectal cancer patients and 527 normal controls were screened. R154H was a rare polymorphism associated with sporadic colorectal cancer patents (OR: 3.586, P= 0.053). R154H does not segregate with cancer phenotypes. Upon examining the possibility of recessive inheritance of R154H, we could not identify any complementary mutations in OGG1, MYH or MTH1. Samples with R154H were further screened for mutations of K-ras, beta-catenin, APC, p53, BRAF and the microsatellite instability (MSI) status. Eight somatic mutations were identified in these genes and G:C to T:A transversion mutations were not dominant in samples harboring R154H. This result raises the possibility that OGG1 R154H may function as a low/moderate-penetrance modifier for colorectal cancer development.

Indexed as

DNA Mutational AnalysisPolymorphism, GeneticAdenomatous Polyposis ColiAdultbeta CateninCase-Control StudiesCodonColorectal NeoplasmsColorectal Neoplasms, Hereditary NonpolyposisCytoskeletal ProteinsDNA GlycosylasesDNA Repair EnzymesExonsFemaleGenes, p53Genes, ras8-oxodGTPasebeta CateninBRAF protein, humanCodonCTNNB1 protein, humanCytoskeletal ProteinsDNA GlycosylasesDNA Repair EnzymesmutY adenine glycosylaseoxoguanine glycosylase 1, humanPhosphoric Monoester HydrolasesProto-Oncogene Proteins B-rafTrans-Activators

Identifiers

PMID15449173
OpenAlexW2082099924

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.