Evidence map›Paper›PMID 15388846›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2004

Arabidopsis C-terminal domain phosphatase-like 1 and 2 are essential Ser-5-specific C-terminal domain phosphatases.

Hisashi Koiwa, Stéphane Hausmann, Woo Young Bang, Akihiro Ueda, Naoko Kondo, Akihiro Hiraguri, Toshiyuki Fukuhara, Jeong Dong Bahk, Dae-Jin Yun, Ray A Bressan and 2 more

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed
8.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed, 127 citations in OpenAlex.

  1. Article
  2. Article
  3. Identification and Functional Analysis ofInternational journal of molecular sciences · 2024
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  5. Article
  6. Article
  7. Article
  8. Article
  9. CPL2 and CPL3 act redundantly inPlant signaling & behavior · 2022
    Article
  10. Review
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  15. Article
  16. Emerging Roles of RNA-Binding Proteins in Seed Development and Performance.International journal of molecular sciences · 2020
    Review
  17. Article
  18. Review
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 1 institution in 1 country.

Hisashi KoiwaDepartment of Horticultural Sciences, Texas A&M University, College Station, TX 77843-2133, USA. koiwa@neo-tamu.edu
Stéphane Hausmann
Woo Young Bang
Akihiro Ueda
Naoko Kondo
Akihiro Hiraguri
Toshiyuki Fukuhara
Jeong Dong Bahk
Dae-Jin Yun
Ray A Bressan
Paul M Hasegawa
Stewart Shuman
Chonnam National University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Transcription and mRNA processing are regulated by phosphorylation and dephosphorylation of the C-terminal domain (CTD) of RNA polymerase II, which consists of tandem repeats of a Y(1)S(2)P(3)T(4)S(5)P(6)S(7) heptapeptide. Previous studies showed that members of the plant CTD phosphatase-like (CPL) protein family differentially regulate osmotic stress-responsive and abscisic acid-responsive transcription in Arabidopsis thaliana. Here we report that AtCPL1 and AtCPL2 specifically dephosphorylate Ser-5 of the CTD heptad in Arabidopsis RNA polymerase II, but not Ser-2. An N-terminal catalytic domain of CPL1, which suffices for CTD Ser-5 phosphatase activity in vitro, includes a signature DXDXT acylphosphatase motif, but lacks a breast cancer 1 CTD, which is an essential component of the fungal and metazoan Fcp1 CTD phosphatase enzymes. The CTD of CPL1, which contains two putative double-stranded RNA binding motifs, is essential for the in vivo function of CPL1 and includes a C-terminal 23-aa signal responsible for its nuclear targeting. CPL2 has a similar domain structure but contains only one double-stranded RNA binding motif. Combining mutant alleles of CPL1 and CPL2 causes synthetic lethality of the male but not the female gametes. These results indicate that CPL1 and CPL2 exemplify a unique family of CTD Ser-5-specific phosphatases with an essential role in plant growth and development.

Indexed as

ArabidopsisArabidopsis ProteinsCell NucleusMolecular Sequence DataPhosphoprotein PhosphatasesPlants, Genetically ModifiedProtein Structure, TertiaryRecombinant Fusion ProteinsRNA-Binding ProteinsRNA Polymerase IISerineSubstrate SpecificityTranscription FactorsArabidopsis ProteinsCPL1 protein, ArabidopsisPhosphoprotein PhosphatasesRecombinant Fusion ProteinsRNA-Binding ProteinsRNA Polymerase IISerineTranscription Factors

Identifiers

PMID15388846
PMCPMC521950
OpenAlexW2114105330

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.