Evidence map›Paper›PMID 15367613›Full record

ArticleJournal of virology2004

Immediate-early expression of the herpes simplex virus type 1 ICP27 transcript is not critical for efficient replication in vitro or in vivo.

Aixu Sun, G V Devi-Rao, M K Rice, L W Gary, D C Bloom, R M Sandri-Goldin, P Ghazal, E K Wagner

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.2field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
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  3. Combined agonist-antagonist genome-wide functional screening identifies broadly active antiviral microRNAs.Proceedings of the National Academy of Sciences of the United States of America · 2010
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Aixu SunDepartment of Molecular Biology and Biochemistry and Center for Virus Research, University of California, Irvine, CA 92717-3900, USA.
G V Devi-Rao
M K Rice
L W Gary
D C Bloom
R M Sandri-Goldin
P Ghazal
E K Wagner
Florida College · USUniversity of California, Irvine · USUniversity of Edinburgh · GBUniversity of Florida · US

Funding

Molecular Genetics of HSV ReactivationR01AI048633 · NIAID · UNIVERSITY OF FLORIDA · PI BLOOM, DAVID C. · 2001 to 2023
$7.2M
Herpes simplex virus gene regulationR37AI021515 · NIAID · UNIVERSITY OF CALIFORNIA-IRVINE · PI SANDRI-GOLDIN, ROZANNE M · 2002 to 2011
$3.8M
CONTROL OF VIRAL RNA SYNTHESIS IN HERPESVIRUS INFECTIONR01CA011861 · NCI · UNIVERSITY OF CALIFORNIA IRVINE · PI OSBORNE, TIMOTHY F · 1985 to 2005
$1.9M
DNA Microarrays for Neurotropic Human HerpesvirusesR01CA090287 · NCI · UNIVERSITY OF CALIFORNIA IRVINE · PI OSBORNE, TIMOTHY F · 2001 to 2004
$1.2M
HERPES SIMPLEX VIRUS GENE REGULATIONR01AI021515 · NIAID · UNIVERSITY OF CALIFORNIA IRVINE · PI SANDRI-GOLDIN, ROZANNE M. · 1985 to 2001
$557k
CONTROL OF VIRAL RNA SYNTHESIS IN HERPESVIRUS INFECTIONR37CA011861 · NCI · UNIVERSITY OF CALIFORNIA IRVINE · PI WAGNER, EDWARD K · 1988 to 1995
–
NCI NIH HHS CA11861NCI NIH HHS CA90287NCI NIH HHS R01 CA011861NCI NIH HHS R01 CA090287NIAID NIH HHS AI21515NIAID NIH HHS AI48633NIAID NIH HHS R01 AI021515NIAID NIH HHS R01 AI048633NIAID NIH HHS R37 AI021515Wellcome Trust
6 · The paper itself

Abstract

We constructed a promoter mutation altering the immediate-early expression of the herpes simplex virus type 1 (HSV-1) ICP27 transcript and its cognate wild-type rescue viruses in order to assess the role of the ICP27 protein in the earliest stages of viral infection by global transcriptional analysis with a DNA microarray. This mutant, ICP27/VP16, replaces the whole ICP27 promoter/enhancer with the VP16 promoter. It demonstrates loss of immediate-early expression of ICP27 according to the criteria expression in the absence of de novo protein synthesis and earliest expression in the kinetic cascade. Significant differences in relative transcript abundances between the mutant and wild-type rescue viruses were limited at the earliest times measured and not evident at all by 4 h after infection. Consistent with this observation, levels of some critical proteins were reduced in the mutant as compared to rescue virus infections at the earliest times tested, but were equivalent by 8 h postinfection. Further, both single and multistep levels of virus replication were equivalent with both mutant and rescue viruses. Thus, altering the immediate-early kinetics of ICP27 leads to a suboptimal quantitative lag phase in gene expression but without consequence for replication fitness in vitro. Infections in vivo also revealed equivalent ability of mutant and rescue viruses to invade the central nervous system of mice following footpad injections. Limitations to an immediate-early role of ICP27 in the biology of HSV are discussed in light of these observations.

Indexed as

Gene Expression Regulation, ViralVirus ReplicationAnimalsBlotting, WesternCells, CulturedDisease Models, AnimalGanglia, SpinalGene Expression ProfilingGenes, Immediate-EarlyHerpes SimplexHerpesvirus 1, HumanHumansImmediate-Early ProteinsMiceMutationOligonucleotide Array Sequence AnalysisICP27 protein, human herpesvirus 1Immediate-Early Proteins

Identifiers

PMID15367613
PMCPMC516393
OpenAlexW2172119934

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.