Evidence map›Paper›PMID 15367589›Full record

ArticleJournal of virology2004

Vaccinia virus mutants with alanine substitutions in the conserved G5R gene fail to initiate morphogenesis at the nonpermissive temperature.

Flavio G da Fonseca, Andrea S Weisberg, Maria F Caeiro, Bernard Moss

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.2field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 30 citations in OpenAlex.

  1. Review
  2. Review
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  4. Article
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  9. Article
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  11. Poxvirus proteomics and virus-host protein interactions.Microbiology and molecular biology reviews : MMBR · 2009
    Review
  12. Article
  13. Article
  14. Poxvirus DNA primase.Proceedings of the National Academy of Sciences of the United States of America · 2007
    Article
  15. Article
  16. Existence of an operative pathway from the endoplasmic reticulum to the immature poxvirus membrane.Proceedings of the National Academy of Sciences of the United States of America · 2006
    Article
  17. Article
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Flavio G da FonsecaLaboratory of Viral Diseases, National Institutes of Health, 4 Center Dr., MSC 0445, Bethesda, MD 20892-0445, USA.
Andrea S Weisberg
Maria F Caeiro
Bernard Moss
National Institute of Allergy and Infectious Diseases · USNational Institutes of Health · US

Funding

Poxvirus EntryZIAAI000539 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI MOSS, BERNARD · 2009 to 2016
$5.6M
Virus Host Interactions And Virion AssemblyZ01AI000539 · NIAID · NIAID EXTRAMURAL ACTIVITIES · PI MOSS, BERNARD · 1988 to 2008
$3.5M
6 · The paper itself

Abstract

The initial characterization of the product of the vaccinia virus G5R gene, which is conserved in all poxviruses sequenced to date, is described. The G5 protein was detected in the core fraction of purified virions, and transcription and translation of the G5R open reading frame occurred early in infection, independently of DNA replication. Attempts to delete the G5R gene and isolate a replication-competent virus were unsuccessful, suggesting that G5R encodes an essential function. We engineered vaccinia virus mutants with clusters of charged amino acids changed to alanines and determined that several were unable to replicate at 40 degrees C but grew well at 37 degrees C. At the nonpermissive temperature, viral gene expression and DNA replication and processing were unperturbed. However, tyrosine phosphorylation and proteolytic cleavage of the A17 membrane protein and proteolytic cleavage of core proteins were inhibited at 40 degrees C, suggesting an assembly defect. The cytoplasm of cells that had been infected at the nonpermissive temperature contained large granular areas devoid of cellular organelles or virus structures except for occasional short crescent-shaped membranes and electron-dense lacy structures. The temperature-sensitive phenotype of the G5R mutants closely resembled the phenotypes of vaccinia virus mutants carrying conditionally lethal F10R protein kinase and H5R mutations. F10, although required for phosphorylation of A17 and viral membrane formation, was synthesized by the G5R mutants under nonpermissive conditions. An intriguing possibility is that G5 participates in the formation of viral membranes, a poorly understood event in poxvirus assembly.

Indexed as

Amino Acid SubstitutionGenes, ViralAmino Acid SequenceCell LineConserved SequenceCytoplasmDNA-Binding ProteinsDNA ReplicationDNA, ViralGenes, EssentialHumansMembrane ProteinsMolecular Sequence DataMorphogenesisMutationOpen Reading FramesA17L protein, Vaccinia virusDNA-Binding ProteinsDNA, ViralH5R protein, Vaccinia virusMembrane Proteinsprotein kinase 2, Vaccinia virusProtein Serine-Threonine KinasesViral Core ProteinsViral Envelope ProteinsViral Proteins

Identifiers

PMID15367589
PMCPMC516429
OpenAlexW2117915343

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.