Evidence map›Paper›PMID 15361071›Full record

ArticleThe Biochemical journal2005

Heterogeneous nuclear ribonucleoprotein K represses transcription from a cytosine/thymidine-rich element in the osteocalcin promoter.

Joseph P Stains, Fernando Lecanda, Dwight A Towler, Roberto Civitelli

Open access · bronzeAbstract read
In one paragraph

Article in The Biochemical journal, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
0.9field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 33 citations in OpenAlex.

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  19. Fast chromatin immunoprecipitation assay.Nucleic acids research · 2006
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Joseph P StainsDivision of Bone and Mineral Diseases, Washington University School of Medicine, and Barnes-Jewish Hospital, St. Louis, MO, USA.
Fernando Lecanda
Dwight A Towler
Roberto Civitelli
Universidad de Navarra · ES

Funding

INTERCELLULAR COMMUNICATION IN BONE CELL PHYSIOLOGYR01AR041255 · NIAMS · WASHINGTON UNIVERSITY · PI CIVITELLI, ROBERTO · 1997 to 2017
$5.3M
MINERAL AND SKELETAL METABOLISMT32AR007033 · NIAMS · WASHINGTON UNIVERSITY · PI TOWLER, DWIGHT A · 1986 to 2004
$1.0M
NIAMS NIH HHS R01 AR041255NIAMS NIH HHS R01 AR41255NIAMS NIH HHS T32 AR007033NIAMS NIH HHS T32 AR07033
6 · The paper itself

Abstract

HnRNP K (heterogeneous nuclear ribonucleoprotein K) was biochemically purified from a screen of proteins co-purifying with binding activity to the osteocalcin promoter. We identify hnRNP K as a novel repressor of osteocalcin gene transcription. Overexpression of hnRNP K lowers the expression of osteocalcin mRNA by 5-fold. Furthermore, luciferase reporter assays demonstrate that overexpression of hnRNP K represses osteocalcin transcription from a CT (cytosine/thymidine)-rich element in the proximal promoter. Electrophoretic mobility-shift analysis reveals that recombinant hnRNP K binds to the CT-rich element, but binds ss (single-stranded), rather than ds (double-stranded) oligonucleotide probes. Accordingly, hnRNP K antibody can supershift a binding activity present in nuclear extracts using ss sense, but not antisense or ds oligonucleotides corresponding to the CT-rich -95 to -47 osteocalcin promoter. Importantly, addition of recombinant hnRNP K to ROS 17/2.8 nuclear extract disrupts formation of a DNA-protein complex on ds CT element oligonucleotides. This action is mutually exclusive with hnRNP K's ability to bind ss DNA. These results demonstrate that hnRNPK, although co-purified with a dsDNA-binding activity, does not itself bind dsDNA. Rather, hnRNP K represses osteocalcin gene transcription by inhibiting the formation of a transcriptional complex on the CT element of the osteocalcin promoter.

Indexed as

AnimalsBase CompositionBase SequenceCell Line, TumorCytosineDNADNA, Single-StrandedHeterogeneous-Nuclear Ribonucleoprotein KMiceMolecular Sequence DataOsteoblastsOsteocalcinOsteosarcomaPromoter Regions, GeneticRatsRepressor ProteinsCytosineDNADNA, Single-StrandedHeterogeneous-Nuclear Ribonucleoprotein KOsteocalcinRepressor ProteinsThymidineTranscription Factors

Identifiers

PMID15361071
PMCPMC1134736
OpenAlexW1994701090

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.