Evidence map›Paper›PMID 15342555›Full record

ArticleGenome research2004

Recurrent sites for new centromere seeding.

Mario Ventura, Stefania Weigl, Lucia Carbone, Maria Francesca Cardone, Doriana Misceo, Mariagrazia Teti, Pietro D'Addabbo, Annelise Wandall, Erik Björck, Pieter J de Jong and 4 more

Open access · bronzeAbstract readCase ReportsComparative Study
In one paragraph

Article in Genome research, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 86 papers.

0numbers the graph read from it
0cells of the map it votes in
86citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

86 citing papers in PubMed, 152 citations in OpenAlex.

  1. Article
  2. Article
  3. Rapid centromere turnover and the adaptive radiation of lemurs.bioRxiv : the preprint server for biology · 2026
    Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Review
  10. Complete sequencing of ape genomes.bioRxiv : the preprint server for biology · 2024
    Article
  11. Article
  12. Review
  13. Pan-centromere reveals widespread centromere repositioning of soybean genomes.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Molecular Dynamics and Evolution of Centromeres in the Genus Equus.International journal of molecular sciences · 2022
    Review
  19. Article
  20. Centromere Identity and the Regulation of Chromosome Segregation.Frontiers in cell and developmental biology · 2022
    Review

26 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 4 countries.

Mario VenturaSezione di Genetica-Dipartimento di Anatomia Patologica e Genetica, University of Bari, 70126 Bari, Italy.
Stefania Weigl
Lucia Carbone
Maria Francesca Cardone
Doriana Misceo
Mariagrazia Teti
Pietro D'Addabbo
Annelise Wandall
Erik Björck
Pieter J de Jong
Xinwei She
Evan E Eichler
Nicoletta Archidiacono
Mariano Rocchi
University of California, Santa Cruz · USIstituto Nazionale di Fisica Nucleare, Sezione di Bari · ITKarolinska Institutet · SEUniversity of Copenhagen · DK

Funding

Sequence and Assembly of Segmental DuplicationsR01HG002385 · NHGRI · UNIVERSITY OF WASHINGTON · PI Evan Eichler · 2001 to 2026
$13.3M
MECHANISM &INSTABILITY OF PERICENTROMERIC DUPLICATIONSR01GM058815 · NIGMS · UNIVERSITY OF WASHINGTON · PI EICHLER, EVAN · 1999 to 2010
$2.9M
NHGRI NIH HHS HG002385NHGRI NIH HHS R01 HG002385NIGMS NIH HHS GM58815NIGMS NIH HHS R01 GM058815Telethon GTF04001
6 · The paper itself

Abstract

Using comparative FISH and genomics, we have studied and compared the evolution of chromosome 3 in primates and two human neocentromere cases on the long arm of this chromosome. Our results show that one of the human neocentromere cases maps to the same 3q26 chromosomal region where a new centromere emerged in a common ancestor of the Old World monkeys approximately 25-40 million years ago. Similarly, the locus in which a new centromere was seeded in the great apes' ancestor was orthologous to the site in which a new centromere emerged in the New World monkeys' ancestor. These data suggest the recurrent use of longstanding latent centromeres and that there is an inherent potential of these regions to form centromeres. The second human neocentromere case (3q24) revealed unprecedented features. The neocentromere emergence was not accompanied by any chromosomal rearrangement that usually triggers these events. Instead, it involved the functional inactivation of the normal centromere, and was present in an otherwise phenotypically normal individual who transmitted this unusual chromosome to the next generation. We propose that the formation of neocentromeres in humans and the emergence of new centromeres during the course of evolution share a common mechanism.

Indexed as

CentromereEvolution, MolecularRecombination, GeneticAnimalsCells, CulturedChromosome MappingChromosomesChromosomes, Human, Pair 3Down SyndromeFemaleGene DuplicationGene RearrangementHumansIn Situ Hybridization, FluorescenceMaleMice

Identifiers

PMID15342555
PMCPMC515314
OpenAlexW2129025949

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.