Evidence map›Paper›PMID 15342502›Full record

ArticleGenetics2004

Expansion and contraction of the DUP240 multigene family in Saccharomyces cerevisiae populations.

Véronique Leh-Louis, Bénédicte Wirth, Serge Potier, Jean-Luc Souciet, Laurence Despons

Open access · bronzeAbstract read
In one paragraph

Article in Genetics, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.7field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 22 citations in OpenAlex.

  1. Discovery of a rapidly evolving yeast defense factor,Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  2. Complete genome sequence and analysis of a Saccharomyces cerevisiae strain used for sugarcane spirit production.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2021
    Article
  3. Article
  4. Article
  5. Eukaryote-to-eukaryote gene transfer events revealed by the genome sequence of the wine yeast Saccharomyces cerevisiae EC1118.Proceedings of the National Academy of Sciences of the United States of America · 2009
    Article
  6. Genome sequencing and comparative analysis of Saccharomyces cerevisiae strain YJM789.Proceedings of the National Academy of Sciences of the United States of America · 2007
    Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Véronique Leh-LouisLaboratoire de Microbiologie et de Génétique, FRE 2326 Université Louis Pasteur/Centre National de la Recherche Scientifique, Institut de Botanique, F-67083 Strasbourg, France.
Bénédicte Wirth
Serge Potier
Jean-Luc Souciet
Laurence Despons
Génétique Moléculaire Génomique Microbiologie · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The influence of duplicated sequences on chromosomal stability is poorly understood. To characterize chromosomal rearrangements involving duplicated sequences, we compared the organization of tandem repeats of the DUP240 gene family in 15 Saccharomyces cerevisiae strains of various origins. The DUP240 gene family consists of 10 members of unknown function in the reference strain S288C. Five DUP240 paralogs on chromosome I and two on chromosome VII are arranged as tandem repeats that are highly polymorphic in copy number and sequence. We characterized DNA sequences that are likely involved in homologous or nonhomologous recombination events and are responsible for intra- and interchromosomal rearrangements that cause the creation and disappearance of DUP240 paralogs. The tandemly repeated DUP240 genes seem to be privileged sites of gene birth and death.

Indexed as

Multigene FamilyBase SequenceChromosomes, FungalDNA, FungalDNA PrimersGene DuplicationGenes, FungalMolecular Sequence DataPhylogenyPolymerase Chain ReactionSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsDNA, FungalDNA PrimersSaccharomyces cerevisiae Proteins

Identifiers

PMID15342502
PMCPMC1470973
OpenAlexW2144870557

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.