Evidence map›Paper›PMID 15333698›Full record

ArticleNucleic acids research2004

Enzymatic switching for efficient and accurate translesion DNA replication.

Scott D McCulloch, Robert J Kokoska, Olga Chilkova, Carrie M Welch, Erik Johansson, Peter M J Burgers, Thomas A Kunkel

Open access · greenAbstract read
In one paragraph

Article in Nucleic acids research, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 50 papers.

0numbers the graph read from it
0cells of the map it votes in
50citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

50 citing papers in PubMed, 91 citations in OpenAlex.

  1. Article
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  8. Article
  9. DNA polymerase δ proofreads errors made by DNA polymerase ε.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Scott D McCullochLaboratory of Molecular Genetics and Laboratory of Structural Biology, National Institute of Environmental Health Sciences, NIH, DHHS, Research Triangle Park, NC 27709, USA.
Robert J Kokoska
Olga Chilkova
Carrie M Welch
Erik Johansson
Peter M J Burgers
Thomas A Kunkel
National Institute of Environmental Health Sciences · US

Funding

Structure-Function Studies Of DNA Replication FidelityZIAES065070 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI KUNKEL, THOMAS A · 2009 to 2025
$30.6M
ENZYMOLOGY OF REPLICATION OF YEAST CHROMOSOMAL DNAR01GM032431 · NIGMS · WASHINGTON UNIVERSITY · PI BURGERS, PETER M · 1985 to 2015
$6.5M
Structure-Function Studies Of DNA Replication FidelityZ01ES065070 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI KUNKEL, THOMAS A · 1991 to 2008
$4.3M
STRUCTURE/FUNCTION OF YEAST DNA POLYMERASE DELTAR01GM058534 · NIGMS · WASHINGTON UNIVERSITY · PI BURGERS, PETER M · 1999 to 2002
$499k
DNA REPLICATION FIDELITYZ01ES065046 · NIEHS · ENVIRONMENTAL HEALTH SCIENCES · PI KUNKEL, THOMAS A · 1987 to 2004
–
NIGMS NIH HHS GM58534NIGMS NIH HHS R01 GM032431NIGMS NIH HHS R01 GM058534
6 · The paper itself

Abstract

When cyclobutane pyrimidine dimers stall DNA replication by DNA polymerase (Pol) delta or epsilon, a switch occurs to allow translesion synthesis by DNA polymerase eta, followed by another switch that allows normal replication to resume. In the present study, we investigate these switches using Saccharomyces cerevisiae Pol delta, Pol epsilon and Pol eta and a series of matched and mismatched primer templates that mimic each incorporation needed to completely bypass a cis-syn thymine-thymine (TT) dimer. We report a complementary pattern of substrate use indicating that enzymatic switching involving localized translesion synthesis by Pol eta and mismatch excision and polymerization by a major replicative polymerase can account for the efficient and accurate dimer bypass known to suppress sunlight-induced mutagenesis and skin cancer.

Indexed as

DNA DamageDNA ReplicationBase Pair MismatchDNA-Directed DNA PolymeraseDNA Polymerase IIDNA Polymerase IIIExodeoxyribonucleasesModels, GeneticPyrimidine DimersSaccharomyces cerevisiaeY-Family DNA PolymerasesDNA-Directed DNA PolymeraseDNA Polymerase IIDNA Polymerase IIIExodeoxyribonucleasesPyrimidine DimersRad30 proteinY-Family DNA Polymerases

Identifiers

PMID15333698
PMCPMC516052
OpenAlexW2141439330

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.