Evidence map›Paper›PMID 15322016›Full record

ArticleInfection and immunity2004

Gastric transcription profile of Helicobacter pylori infection in the rhesus macaque.

Jennifer L Huff, Lori M Hansen, Jay V Solnick

Open access · greenAbstract read
In one paragraph

Article in Infection and immunity, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
3.3field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 38 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Roles of galectins in infection.Nature reviews. Microbiology · 2009
    Review
  11. Article
  12. Review
  13. RNA profiling in host-pathogen interactions.Current opinion in microbiology · 2007
    Review
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 2 countries.

Jennifer L HuffDepartment of Medical Microbiology and Immunology, Center for Comparative Medicine, University of California, Davis, Davis, CA 95616, USA. jlmshuff@ucdavis.edu
Lori M Hansen
Jay V Solnick
University of California, Davis · US

Funding

Gene expression during H. pylori-host interactionsR01AI042081 · NIAID · UNIVERSITY OF CALIFORNIA DAVIS · PI SOLNICK, JAY V. · 1998 to 2007
$2.5M
Transcription of H. pylori Genes in the Rhesus MonkeyR21RR015293 · NCRR · UNIVERSITY OF CALIFORNIA DAVIS · PI SOLNICK, JAY V. · 2001 to 2002
$292k
NCRR NIH HHS RR15293NIAID NIH HHS AI42081NIAID NIH HHS R01 AI042081
6 · The paper itself

Abstract

Infection with Helicobacter pylori is usually asymptomatic but sometimes progresses to peptic ulcer disease or gastric adenocarcinoma. The development of disease involves both host and bacterial factors. In order to better understand host factors in pathogenesis, we studied the gastric transcription profile of H. pylori infection in the rhesus macaque by using DNA microarrays. Significant changes were found in the expression of genes important for innate immunity, chemokines and cytokines, cell growth and differentiation, apoptosis, structural proteins, and signal transduction and transcription factors. This broad transcription profile demonstrated expected up-regulation of cell structural elements and the host inflammatory and immune response, as well as the novel finding of down-regulation of heat shock proteins. These results provide a unique view of acute H. pylori infection in a relevant animal model system and will direct future studies regarding the host response to H. pylori infection.

Indexed as

Gene Expression RegulationTranscription, GeneticAcute DiseaseAnimalsDisease Models, AnimalGastric MucosaGastritisGene Expression ProfilingHeat-Shock ProteinsHelicobacter InfectionsHelicobacter pyloriHumansMacaca mulattaMaleOligonucleotide Array Sequence AnalysisProteinsHeat-Shock ProteinsProteins

Identifiers

PMID15322016
PMCPMC517414
OpenAlexW2167908770

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.