Evidence map›Paper›PMID 15319476›Full record

ArticleThe Plant cell2004

Isolation and functional analysis of Arabidopsis stress-inducible NAC transcription factors that bind to a drought-responsive cis-element in the early responsive to dehydration stress 1 promoter.

Lam-Son Phan Tran, Kazuo Nakashima, Yoh Sakuma, Sean D Simpson, Yasunari Fujita, Kyonoshin Maruyama, Miki Fujita, Motoaki Seki, Kazuo Shinozaki, Kazuko Yamaguchi-Shinozaki

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In one paragraph

Article in The Plant cell, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 681 papers.

0numbers the graph read from it
0cells of the map it votes in
681citing papers in PubMed
28.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

681 citing papers in PubMed, 1,512 citations in OpenAlex.

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621 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Lam-Son Phan TranBiological Resources Division, Japan International Research Center for Agricultural Sciences, Tsukuba, Ibaraki 305-8686, Japan.
Kazuo Nakashima
Yoh Sakuma
Sean D Simpson
Yasunari Fujita
Kyonoshin Maruyama
Miki Fujita
Motoaki Seki
Kazuo Shinozaki
Kazuko Yamaguchi-Shinozaki
Japan International Research Center for Agricultural Sciences · JPJapan Science and Technology Agency · JPResearch & Development Corporation · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The MYC-like sequence CATGTG plays an important role in the dehydration-inducible expression of the Arabidopsis thaliana EARLY RESPONSIVE TO DEHYDRATION STRESS 1 (ERD1) gene, which encodes a ClpA (ATP binding subunit of the caseinolytic ATP-dependent protease) homologous protein. Using the yeast one-hybrid system, we isolated three cDNA clones encoding proteins that bind to the 63-bp promoter region of erd1, which contains the CATGTG motif. These three cDNA clones encode proteins named ANAC019, ANAC055, and ANAC072, which belong to the NAC transcription factor family. The NAC proteins bound specifically to the CATGTG motif both in vitro and in vivo and activated the transcription of a beta-glucuronidase (GUS) reporter gene driven by the 63-bp region containing the CATGTG motif in Arabidopsis T87 protoplasts. The expression of ANAC019, ANAC055, and ANAC072 was induced by drought, high salinity, and abscisic acid. A histochemical assay using P(NAC)-GUS fusion constructs showed that expression of the GUS reporter gene was localized mainly to the leaves of transgenic Arabidopsis plants. Using the yeast one-hybrid system, we determined the complete NAC recognition sequence, containing CATGT and harboring CACG as the core DNA binding site. Microarray analysis of transgenic plants overexpressing either ANAC019, ANAC055, or ANAC072 revealed that several stress-inducible genes were upregulated in the transgenic plants, and the plants showed significantly increased drought tolerance. However, erd1 was not upregulated in the transgenic plants. Other interacting factors may be necessary for the induction of erd1 in Arabidopsis under stress conditions.

Indexed as

Abscisic AcidAcclimatizationAdenosine TriphosphatasesAmino Acid MotifsAmino Acid SequenceArabidopsisArabidopsis ProteinsBase SequenceBinding SitesChloroplast ProteinsDehydrationDNA-Binding ProteinsDNA, ComplementaryMolecular Sequence DataPlant LeavesPlants, Genetically ModifiedAbscisic AcidAdenosine TriphosphatasesANAC055 protein, ArabidopsisANAC072 protein, ArabidopsisArabidopsis ProteinsChloroplast ProteinsClpD protein, ArabidopsisDNA-Binding ProteinsDNA, ComplementaryNAC019 protein, ArabidopsisSaline Solution, HypertonicTranscription Factors

Identifiers

PMID15319476
PMCPMC520947
OpenAlexW2105422221

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.