Evidence map›Paper›PMID 15317794›Full record

ArticleJournal of bacteriology2004

Characterization of Salmonella enterica subspecies I genovars by use of microarrays.

S Porwollik, E F Boyd, C Choy, P Cheng, L Florea, E Proctor, M McClelland

Open access · greenAbstract readComparative Study
In one paragraph

Article in Journal of bacteriology, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 108 papers.

0numbers the graph read from it
0cells of the map it votes in
108citing papers in PubMed
22.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

108 citing papers in PubMed, 235 citations in OpenAlex.

  1. Microorganisms · 2026
    Review
  2. Persistence of non-typhoidalFrontiers in microbiology · 2026
    Review
  3. Article
  4. Applied and environmental microbiology · 2025
    Article
  5. Non-typhoidalFrontiers in veterinary science · 2025
    Article
  6. Review
  7. Article
  8. Article
  9. Application of a novel lyticFrontiers in microbiology · 2023
    Article
  10. Article
  11. Retail Chicken Carcasses as a Reservoir of Multidrug-ResistantMicrobial drug resistance (Larchmont, N.Y.) · 2022
    Article
  12. Antimicrobial Susceptibility ofInternational journal of microbiology · 2022
    Article
  13. Virulence and antimicrobial resistance factors inFrontiers in veterinary science · 2022
    Article
  14. Review
  15. Article
  16. Zoonotic potential and prevalence ofInfection ecology & epidemiology · 2021
    Review
  17. Article
  18. Article
  19. Article
  20. Review

48 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

S PorwollikSidney Kimmel Cancer Center, 10835 Altman Row, San Diego, CA 92103, USA.
E F Boyd
C Choy
P Cheng
L Florea
E Proctor
M McClelland
Sidney Kimmel Cancer Center · US

Funding

DETAILED RESTRICTION MAP--SALMONELLA TYPHIMURIUM GENOMER01AI034829 · NIAID · SIDNEY KIMMEL CANCER CENTER · PI MCCLELLAND, MICHAEL · 1993 to 2006
$1.9M
NIAID NIH HHS AI34829NIAID NIH HHS R01 AI034829
6 · The paper itself

Abstract

Subspecies 1 of Salmonella enterica is responsible for almost all Salmonella infections of warm-blooded animals. Within subspecies 1 there are over 2,300 known serovars that differ in their prevalence and the diseases that they cause in different hosts. Only a few of these serovars are responsible for most Salmonella infections in humans and domestic animals. The gene contents of 79 strains from the most prevalent serovars were profiled by microarray analysis. Strains within the same serovar often differed by the presence and absence of hundreds of genes. Gene contents sometimes differed more within a serovar than between serovars. Groups of strains that share a distinct profile of gene content can be referred to as "genovars" to distinguish them from serovars. Several misassignments within the Salmonella reference B collection were detected by genovar typing and were subsequently confirmed serologically. Just as serology has proved useful for understanding the host range and pathogenic manifestations of Salmonella, genovars are likely to further define previously unrecognized specific features of Salmonella infections.

Indexed as

Genetic VariationGenome, BacterialNucleic Acid HybridizationOligonucleotide Array Sequence AnalysisDNA, BacterialGenes, BacterialGenotypeHumansPhylogenySalmonella entericaSalmonella InfectionsSalmonella typhiSalmonella typhimuriumSerotypingDNA, Bacterial

Identifiers

PMID15317794
PMCPMC516822
OpenAlexW2119098877

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.