Evidence map›Paper›PMID 15317789›Full record

ArticleJournal of bacteriology2004

Hypercyst mutants in Rhodospirillum centenum identify regulatory loci involved in cyst cell differentiation.

James E Berleman, Benjamin M Hasselbring, Carl E Bauer

Open access · greenAbstract read
In one paragraph

Article in Journal of bacteriology, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
0.5field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 43 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Alarmones as Vestiges of a Bygone RNA World.Journal of molecular evolution · 2019
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Review
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Review
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

James E BerlemanDepartment of Biology, Indiana University, Myers Hall, 915 E. Third St., Bloomington, IN 47405, USA.
Benjamin M Hasselbring
Carl E Bauer
Indiana University Bloomington · US

Funding

TRAINING IN GENETICST32GM007757 · NIGMS · TRUSTEES OF INDIANA UNIVERSITY · PI KUMAR, JUSTIN P · 1985 to 2014
$8.1M
Regulatory Circuits Controlling Development of Dormant Microbial CystsR01GM099703 · NIGMS · TRUSTEES OF INDIANA UNIVERSITY · PI BAUER, CARL EUGENE · 2012 to 2015
$1.0M
NIGMS NIH HHS GM007757NIGMS NIH HHS R01 GM099703NIGMS NIH HHS T32 GM007757
6 · The paper itself

Abstract

Rhodospirillum centenum is a purple photosynthetic bacterium that forms resting cyst cells when starved for nutrients. In this study, we demonstrate that chalcone synthase gene (chsA) expression is developmentally regulated, with expression of chsA increasing up to 86-fold upon induction of the cyst developmental cycle. Screening for mini-Tn5-induced mutants that exhibit elevated chsA::lacZ expression has led to the isolation of a set of R. centenum mutants that display increased chsA gene expression concomitant with constitutive induction of the cyst developmental cycle. These "hypercyst" mutants have lost the ability to regulate cyst cell formation in response to nutrient availability. Sequence analysis indicates that the mini-Tn5-disrupted genes code for a variety of factors, including metabolic enzymes and a large set of potential regulatory factors, including four gene products with homology to histidine sensor kinases and three with homology to response regulators. Several of the disrupted genes also have sequence similarity to che-like signal transduction components.

Indexed as

Gene Expression Regulation, BacterialAcyltransferasesAdaptation, PhysiologicalArtificial Gene Fusionbeta-GalactosidaseChemotaxisDNA, BacterialDNA Transposable ElementsGenes, BacterialGenes, RegulatorGenes, ReporterHistidine KinaseMolecular Sequence DataMutagenesis, InsertionalProtein KinasesRhodospirillum centenumAcyltransferasesbeta-GalactosidaseDNA, BacterialDNA Transposable Elementsflavanone synthetaseHistidine KinaseProtein Kinases

Identifiers

PMID15317789
PMCPMC516826
OpenAlexW1998761525

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.